CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0002s07010
(
Populus trichocarpa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
POPTR_0002s07010
T066929_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27109.1
M01163_2.00
Cannabis sativa
KACAGCTR
YAGCTGTM
PBM
Lambert et al.(2019)
pTH10158
0.788
0.961
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s07010.1
bZIP
181
231
DPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQTEATTLSAQVTMLQ
Links
Other
bZIP
family TFs
Other
Populus trichocarpa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_066250
Aspergillus clavatus
CADACLAG00006220
N
ANIA_03369
Aspergillus nidulans
CADANIAG00009673
N
ATEG_05520
Aspergillus terreus
CADATEAG00004413
N
ATEG_08685
Aspergillus terreus
CADATEAG00006707
N
CADAFLAG00012354
Aspergillus flavus
CADAFLAG00012354
N
e_gw1.00868.19.1
Aspergillus carbonarius
e_gw1.00868.19.1
N
M408DRAFT_327253
Serendipita vermifera
M408DRAFT_327253
N
Pc16g06860
Penicillium chrysogenum
Pc16g06860
N
Pc21g13820
Penicillium chrysogenum
Pc21g13820
N
PCH_Pc16g06860
Penicillium rubens
PCH_Pc16g06860
N
PCH_Pc21g13820
Penicillium rubens
PCH_Pc21g13820
N
PDE_05999
Penicillium oxalicum
PDE_05999
N
PDIP_05790
Penicillium digitatum
PDIP_05790
N
PDIP_55190
Penicillium digitatum
PDIP_55190
N
PEX1_026370
Penicillium expansum
PEX1_026370
N
PEX1_033140
Penicillium expansum
PEX1_033140
N
PITC_043160
Penicillium italicum
PITC_043160
N
PMAA_045030
Talaromyces marneffei
PMAA_045030
N
PMAA_045030
Penicillium marneffei
PMAA_045030
N
TSTA_034230
Talaromyces stipitatus
TSTA_034230
N