POPTR_0002s12710 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0002s12710 T066933_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.850 0.852
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.850 0.852
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.824 0.770
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.824 0.770
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.824 0.770
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.819 0.787
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.812 0.672
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.812 0.672
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.812 0.672
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.812 0.672
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.812 0.672
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.812 0.672
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.812 0.705
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.807 0.656
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.807 0.656
DPBF3
M01133_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Lambert et al.(2019)
pTH11531 		0.786 0.607
DPBF3
M01058_2.00 		Arabidopsis thaliana
HBACGTGKM
KMCACGTVD		 PBM
Sullivan et al.(2014)
pTH7219 		0.786 0.607
DPBF3
M01059_2.00 		Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7547 		0.786 0.607
DPBF3
M06777_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_colamp_a 		0.786 0.607
DPBF3
M06778_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_col_v31 		0.786 0.607
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s12710.1 bZIP 376 436

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

375 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R013029 Calypte anna Aan_R013029 I
ACEP22947 Atta cephalotes ACEP22947 I
ACHR004409 Anopheles christyi ACHR004409 I
ADAC003479 Anopheles darlingi ADAC003479 I
ADIR000236 Anopheles dirus ADIR000236 I
AFAF000230 Anopheles farauti AFAF000230 I
Afo_R003215 Aptenodytes forsteri Afo_R003215 I
AFUN004906 Anopheles funestus AFUN004906 I
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I
Alligator_sinensis_CCG017609.1 Alligator sinensis Alligator_sinensis_CCG017609.1 I
AMIN008984 Anopheles minimus AMIN008984 I
ASIS004664 Anopheles sinensis ASIS004664 I
BGIBMGA011565 Bombyx mori BGIBMGA011565 I
BTMF_0000130101 Brugia timori BTMF_0000130101 I
CBG07590 Caenorhabditis briggsae CBG07590 I
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I
CJA00446 Caenorhabditis japonica CJA00446 I
Cmyd_10009821 Chelonia mydas Cmyd_10009821 I
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I
EBF1 Callithrix jacchus ENSCJAG00000019016 I
EBF1 Dasypus novemcinctus ENSDNOG00000035396 I
EBF1 Equus caballus ENSECAG00000007964 I
EBF1 Homo sapiens ENSG00000164330 D
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I
EBF1 Loxodonta africana ENSLAFG00000017522 I
EBF1 Sus scrofa ENSSSCG00000017046 I
EBF1 Tupaia belangeri ENSTBEG00000007800 I
EBF1 Tetraodon nigroviridis ENSTNIG00000016148 I
ebf1a Danio rerio ENSDARG00000099849 I
ebf1b Danio rerio ENSDARG00000069196 I
EBF2 Bos taurus ENSBTAG00000040390 I
EBF2 Canis familiaris ENSCAFG00000008918 I
EBF2 Cavia porcellus ENSCPOG00000001463 I
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I
EBF2 Homo sapiens ENSG00000221818 D
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I
EBF2 Gallus gallus ENSGALG00000000242 I
EBF2 Gorilla gorilla ENSGGOG00000001585 I
EBF2 Loxodonta africana ENSLAFG00000022465 I
EBF2 Meleagris gallopavo ENSMGAG00000000791 I
EBF2 Myotis lucifugus ENSMLUG00000011509 I
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I
EBF2 Otolemur garnettii ENSOGAG00000010783 I
EBF2 Pan troglodytes ENSPTRG00000003058 I
Ebf2 Rattus norvegicus ENSRNOG00000011548 I
EBF2 Sus scrofa ENSSSCG00000009655 I
EBF2 Taeniopygia guttata ENSTGUG00000004267 I
ebf2 Takifugu rubripes ENSTRUG00000011528 I
ebf2 Xenopus tropicalis XB-GENE-971136 I
ebf2.S Xenopus laevis XB-GENE-971141 I
EBF3 Anolis carolinensis ENSACAG00000008590 I
EBF3 Bos taurus ENSBTAG00000008272 I
EBF3 Canis familiaris ENSCAFG00000013267 I
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I
EBF3 Homo sapiens ENSG00000108001 D
EBF3 Myotis lucifugus ENSMLUG00000005478 I
EBF3 Macaca mulatta ENSMMUG00000011447 I
Ebf3 Mus musculus ENSMUSG00000010476 I
EBF3 Otolemur garnettii ENSOGAG00000007572 I
Ebf3 Rattus norvegicus ENSRNOG00000016102 I
EBF3 Taeniopygia guttata ENSTGUG00000011600 I
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I
EBF4 Callithrix jacchus ENSCJAG00000021027 I
EBF4 Macaca mulatta ENSMMUG00000021331 I
Ebf4 Mus musculus ENSMUSG00000053552 D
EBF4 Oryzias latipes ENSORLG00000020414 I
EBF4 Pteropus vampyrus ENSPVAG00000006830 I
EBF4 Tursiops truncatus ENSTTRG00000003459 I
ebf4 Xenopus tropicalis XB-GENE-6030626 I
ENSACAG00000010823 Anolis carolinensis ENSACAG00000010823 I
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I
ENSCSAG00000010974 Chlorocebus sabaeus ENSCSAG00000010974 I
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I
ENSFCAG00000027202 Felis catus ENSFCAG00000027202 I
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I
ENSMPUG00000013414 Mustela putorius furo ENSMPUG00000013414 I
ENSNLEG00000009110 Nomascus leucogenys ENSNLEG00000009110 I
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I
ENSP00000405003 Macaca fascicularis ENSP00000405003 I
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I
ENSPMAG00000004238 Petromyzon marinus ENSPMAG00000004238 I
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I
ENSSTOG00000007966 Ictidomys tridecemlineatus ENSSTOG00000007966 I
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I
estExt_gwp.C_3810003 Branchiostoma floridae estExt_gwp.C_3810003 I
GA24435 Drosophila pseudoobscura FBgn0245832 I
GF11778 Drosophila ananassae FBgn0088818 I
GH12956 Drosophila grimshawi FBgn0120434 I
GJ21945 Drosophila virilis FBgn0209060 I
GK23295 Drosophila willistoni FBgn0225257 I
GL10656 Drosophila persimilis FBgn0148266 I
GPLIN_000159400 Globodera pallida GPLIN_000159400 I
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I
HelroG112029 Helobdella robusta HelroG112029 I
HMEL014948 Heliconius melpomene HMEL014948 I
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I
ISCW021817 Ixodes scapularis ISCW021817 I
KGM_09934 Danaus plexippus KGM_09934 I
L889_g1820 Steinernema feltiae L889_g1820 I
L898_g8304 Steinernema monticolum L898_g8304 I
LCUP013862 Lucilia cuprina LCUP013862 I
LDEC007542 Leptinotarsa decemlineata LDEC007542 I
LOAG_18199 Loa loa LOAG_18199 I
LotgiG225788 Lottia gigantea LotgiG225788 I
MCINX016126 Melitaea cinxia MCINX016126 I
MDOA011385 Musca domestica MDOA011385 I
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I
Myotis_brandtii_EBF2_10005813 Myotis brandtii Myotis_brandtii_EBF2_10005813 I
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I
nRc.2.0.1.g14013 Romanomermis culicivorax nRc.2.0.1.g14013 I
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I
OESDEN_10293 Oesophagostomum dentatum OESDEN_10293 I
OFLC_0000294401 Onchocerca flexuosa OFLC_0000294401 I
Pvit_11383 Pogona vitticeps Pvit_11383 I
Pvit_12046 Pogona vitticeps Pvit_12046 I
Pvit_12666 Pogona vitticeps Pvit_12666 I
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I
SMU15024001 Schmidtea mediterranea SMU15024001 I
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I