POPTR_0003s09630 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0003s09630 T066939_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.904 0.891
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.867 0.812
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.867 0.812
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.861 0.797
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.861 0.797
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.835 0.672
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.835 0.672
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.835 0.672
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.835 0.672
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.835 0.672
HBP1A_WHEAT
M10041_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1A_Q2 		0.811 0.734
HBP1A_WHEAT
M10042_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBPA1_Q6_01 		0.811 0.734
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.795 0.641
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.795 0.641
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.793 0.578
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.792 0.625
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.790 0.547
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.783 0.609
EmBP-1
M02659_2.00 		Triticum aestivum
CCACGTSW
WSACGTGG		 SELEX
Mathelier et al.(2014)
MA0128.1 		0.783 0.609
EMBP1_WHEAT
M09921_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_02 		0.783 0.609
EMBP1_WHEAT
M09922_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_Q2 		0.783 0.609
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s09630.1 bZIP 303 366

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

282 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.833
BGIOSGA025382 Oryza indica BGIOSGA025382 I 0.790
Bo1g005460 Brassica oleracea Bo1g005460 I 0.820
Bra010572 Brassica rapa Bra010572 I 0.829
Bra011701 Brassica rapa Bra011701 I 0.820
BRADI1G54180 Brachypodium distachyon BRADI1G54180 I 0.000
BRADI3G02730 Brachypodium distachyon BRADI3G02730 I 0.782
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.815
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.853
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.825
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.830
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.825
GRMZM2G095078 Zea mays GRMZM2G095078 I 0.790
GRMZM2G171370 Zea mays GRMZM2G171370 I 0.790
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I 0.794
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.816
HBP1A_WHEAT Triticum aestivum HBP1A_WHEAT D 0.811
LPERR07G06120 Leersia perrieri LPERR07G06120 I 0.790
MDP0000231274 Malus domestica MDP0000231274 I 0.837
mgf008605m Mimulus guttatus mgf008605m I 0.822
MLOC_81641 Hordeum vulgare MLOC_81641 I 0.811
OB07G15280 Oryza brachyantha OB07G15280 I 0.790
OBART07G07070 Oryza barthii OBART07G07070 I 0.790
OGLUM07G06770 Oryza glumaepatula OGLUM07G06770 I 0.790
OLONG_021599 Oryza longistaminata OLONG_021599 I 0.790
OMERI07G05820 Oryza meridionalis OMERI07G05820 I 0.790
ONIVA07G05320 Oryza nivara ONIVA07G05320 I 0.790
OPUNC07G06790 Oryza punctata OPUNC07G06790 I 0.790
ORUFI07G07050 Oryza rufipogon ORUFI07G07050 I 0.790
OS07G0209800 Oryza sativa OS07G0209800 I 0.790
Pavir.Ba03287 Panicum virgatum Pavir.Ba03287 I 0.790
Pavir.Bb00931 Panicum virgatum Pavir.Bb00931 I 0.790
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.837
Sb02g006350 Sorghum bicolor Sb02g006350 I 0.790
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.812
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.812
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.834
Si030123m.g Setaria italica Si030123m.g I 0.790
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.837
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I 0.848
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.837
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.829
Traes_2BL_245DDBC7B Triticum aestivum Traes_2BL_245DDBC7B I 0.000
Traes_6BS_05264DAEA Triticum aestivum Traes_6BS_05264DAEA I 0.811
TRIUR3_18117 Triticum urartu TRIUR3_18117 I 0.811
TRIUR3_31142 Triticum urartu TRIUR3_31142 I 0.000