Alligator_sinensis_CCG009650.2 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG009650.2 T069856_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Batf
M08829_2.00 		Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN		 Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A 		0.847 0.873
Batf
M09495_2.00 		Mus musculus
VTGASTCABH
DVTGASTCAB		 Misc
Heinz et al.(2010)
Th17-BATF_GSE39756 		0.847 0.873
BATF
M04307_2.00 		Homo sapiens
NVVYGMCACN
NGTGKCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX 		0.836 0.857
BATF
M07821_2.00 		Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA		 ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha 		0.836 0.857
BATF
M08799_2.00 		Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN		 Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A 		0.836 0.857
BATF
M09971_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_01 		0.836 0.857
BATF
M09972_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_02 		0.836 0.857
BATF
M09973_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_03 		0.836 0.857
BATF
M09974_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_04 		0.836 0.857
BATF
M04308_2.00 		Homo sapiens
NVVYGACACN
NGTGTCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX 		0.836 0.857
Batf3
M08826_2.00 		Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A 		0.828 0.635
BATF3
M02833_2.00 		Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR		 SELEX
Jolma et al.(2013)
BATF3_1 		0.803 0.651
BATF3
M04268_2.00 		Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV		 SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX 		0.803 0.651
BATF3
M04270_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX 		0.803 0.651
BATF3
M04025_2.00 		Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1 		0.803 0.651
BATF3
M04026_2.00 		Homo sapiens
GRTGACGTGGS
SCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2 		0.803 0.651
BATF3
M08794_2.00 		Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B 		0.803 0.651
BATF3
M09962_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF3_02 		0.803 0.651
BATF3
M04269_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX 		0.803 0.651
BATF3
M04271_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX 		0.803 0.651
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG009650.2 bZIP 26 88

Links

Other bZIP family TFs
Other Alligator sinensis TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_040630 Aspergillus clavatus CADACLAG00003598 N
AFUA_3G12780 Aspergillus fumigatus CADAFUAG00004940 N
ANIA_03120 Aspergillus nidulans CADANIAG00009956 N
ATEG_04118 Aspergillus terreus CADATEAG00009474 N
CADAFLAG00003976 Aspergillus flavus CADAFLAG00003976 N
CADANGAG00002394 Aspergillus niger CADANGAG00002394 N
EURHEDRAFT_413504 Aspergillus ruber EURHEDRAFT_413504 N
fgenesh1_pm.00866_#_543 Aspergillus carbonarius fgenesh1_pm.00866_#_543 N
NFIA_064520 Neosartorya fischeri CADNFIAG00006048 N
Pc18g01090 Penicillium chrysogenum Pc18g01090 N
PDE_05054 Penicillium oxalicum PDE_05054 N
PDIP_74480 Penicillium digitatum PDIP_74480 N
PEX1_100710 Penicillium expansum PEX1_100710 N
PITC_012620 Penicillium italicum PITC_012620 N
PMAA_022940 Talaromyces marneffei PMAA_022940 N
PMAA_022940 Penicillium marneffei PMAA_022940 N
PVAR5_5410 Byssochlamys spectabilis PVAR5_5410 N
TSTA_031390 Talaromyces stipitatus TSTA_031390 N
U727_00433930231 Penicillium solitum U727_00433930231 N