gw1.27.125.1 (Physcomitrella patens)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 gw1.27.125.1 T071165_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.840 0.710
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.840 0.710
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.840 0.710
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.840 0.710
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.840 0.710
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.821 0.645
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.821 0.645
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.820 0.677
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.819 0.645
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.816 0.613
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.816 0.613
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.811 0.629
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.811 0.629
EmBP-1
M02659_2.00 		Triticum aestivum
CCACGTSW
WSACGTGG		 SELEX
Mathelier et al.(2014)
MA0128.1 		0.809 0.629
EMBP1_WHEAT
M09921_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_02 		0.809 0.629
EMBP1_WHEAT
M09922_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_Q2 		0.809 0.629
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.807 0.645
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.806 0.645
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.798 0.613
GBF3
M01779_2.00 		Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN		 PBM
Weirauch et al.(2014)
pTH7328 		0.789 0.629
GBF3
M06770_2.00 		Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH		 Dap-seq
OMalley et al.(2016)
GBF3_colamp 		0.789 0.629
GBF3
M06771_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
GBF3_col 		0.789 0.629
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.27.125.1 bZIP 2 63

Links

Other bZIP family TFs
Other Physcomitrella patens TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29889.m003269 Ricinus communis 29889.m003269 I 0.000
AMTR_s00057p00042800 Amborella trichopoda AMTR_s00057p00042800 I 0.000
Aquca_003_00568 Aquilegia coerulea Aquca_003_00568 I 0.000
AT3G16940 Arabidopsis thaliana AT3G16940 I 0.000
Bo5g123580 Brassica oleracea Bo5g123580 I 0.000
Bo8g043280 Brassica oleracea Bo8g043280 I 0.000
Bostr.19424s0974 Boechera stricta Bostr.19424s0974 I 0.000
Bostr.30275s0060 Boechera stricta Bostr.30275s0060 I 0.000
Bra022188 Brassica rapa Bra022188 I 0.000
Bra038040 Brassica rapa Bra038040 I 0.000
BRADI1G27170 Brachypodium distachyon BRADI1G27170 I 0.000
Cagra.0053s0009 Capsella grandiflora Cagra.0053s0009 I 0.000
Cagra.4396s0001 Capsella grandiflora Cagra.4396s0001 I 0.000
CAMTA5 Arabidopsis thaliana AT4G16150 D 0.000
Carubv10004090m.g Capsella rubella Carubv10004090m.g I 0.000
Carubv10012963m.g Capsella rubella Carubv10012963m.g I 0.000
cassava40488.m1 Manihot esculenta cassava40488.m1 I 0.000
Ca_02997 Cicer arietinum Ca_02997 I 0.000
chr4.CM0429.140.nd Lotus japonicus chr4.CM0429.140.nd I 0.000
Ciclev10004273m.g Citrus clementina Ciclev10004273m.g I 0.000
Cla009415 Citrullus lanatus Cla009415 I 0.000
Cucsa.325250 Cucumis sativus Cucsa.325250 I 0.000
Eucgr.H04035 Eucalyptus grandis Eucgr.H04035 I 0.000
evm.TU.supercontig_929.1 Carica papaya evm.TU.supercontig_929.1 I 0.000
fgenesh1_pg.C_scaffold_7002321 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7002321 I 0.000
fgenesh1_pm.C_scaffold_3001474 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3001474 I 0.000
gene10891-v1.0-hybrid Fragaria vesca gene10891-v1.0-hybrid I 0.000
GLYMA07G37090 Glycine max GLYMA07G37090 I 0.000
GLYMA09G04310 Glycine max GLYMA09G04310 I 0.000
GLYMA15G15350 Glycine max GLYMA15G15350 I 0.000
GLYMA17G03510 Glycine max GLYMA17G03510 I 0.000
Gorai.004G075100 Gossypium raimondii Gorai.004G075100 I 0.000
Gorai.005G065700 Gossypium raimondii Gorai.005G065700 I 0.000
Gorai.006G079000 Gossypium raimondii Gorai.006G079000 I 0.000
Gorai.008G091800 Gossypium raimondii Gorai.008G091800 I 0.000
Gorai.011G198600 Gossypium raimondii Gorai.011G198600 I 0.000
Gorai.012G074000 Gossypium raimondii Gorai.012G074000 I 0.000
GRMZM2G032336 Zea mays GRMZM2G032336 I 0.000
GSMUA_Achr8G10490_001 Musa acuminata GSMUA_Achr8G10490_001 I 0.000
Lus10016873.g Linum usitatissimum Lus10016873.g I 0.000
Lus10036455.g Linum usitatissimum Lus10036455.g I 0.000
Lus10037738.g Linum usitatissimum Lus10037738.g I 0.000
Lus10041126.g Linum usitatissimum Lus10041126.g I 0.000
MDP0000164873 Malus domestica MDP0000164873 I 0.000
MDP0000167705 Malus domestica MDP0000167705 I 0.000
MDP0000233860 Malus domestica MDP0000233860 I 0.000
mgf012030m Mimulus guttatus mgf012030m I 0.000
mgf013655m Mimulus guttatus mgf013655m I 0.000
MTR_2g034650 Medicago truncatula MTR_2g034650 I 0.000
MTR_4g121840 Medicago truncatula MTR_4g121840 I 0.000
OB07G20740 Oryza brachyantha OB07G20740 I 0.000
OGLUM07G13800 Oryza glumaepatula OGLUM07G13800 I 0.000
OLONG_014480 Oryza longistaminata OLONG_014480 I 0.000
ONIVA07G13300 Oryza nivara ONIVA07G13300 I 0.000
OPUNC07G13630 Oryza punctata OPUNC07G13630 I 0.000
orange1.1g002476m.g Citrus sinensis orange1.1g002476m.g I 0.000
ORUFI07G15090 Oryza rufipogon ORUFI07G15090 I 0.000
OS07G0490200 Oryza sativa OS07G0490200 I 0.000
Pavir.Ba00948 Panicum virgatum Pavir.Ba00948 I 0.000
Pavir.J11066 Panicum virgatum Pavir.J11066 I 0.000
PK20811.1 Cannabis sativa PK20811.1 I 0.000
POPTR_0008s10730 Populus trichocarpa POPTR_0008s10730 I 0.000
POPTR_0010s15160 Populus trichocarpa POPTR_0010s15160 I 0.000
PRUPE_ppa001493mg Prunus persica PRUPE_ppa001493mg I 0.000
Q2WEL1_ORYSA Oryza sativa Q2WEL1_ORYSA D 0.000
SapurV1A.0050s0650 Salix purpurea SapurV1A.0050s0650 I 0.000
SapurV1A.0060s0130 Salix purpurea SapurV1A.0060s0130 I 0.000
Sb02g033620 Sorghum bicolor Sb02g033620 I 0.000
Si028797m.g Setaria italica Si028797m.g I 0.000
Si028862m.g Setaria italica Si028862m.g I 0.000
Solyc01g060170.2 Solanum lycopersicum Solyc01g060170.2 I 0.000
Solyc12g099340.1 Solanum lycopersicum Solyc12g099340.1 I 0.000
TCM_021327 Theobroma cacao TCM_021327 I 0.000
Thhalv10020047m.g Eutrema salsugineum Thhalv10020047m.g I 0.000
Thhalv10024342m.g Eutrema salsugineum Thhalv10024342m.g I 0.000
Traes_2AS_4C4190DEB Triticum aestivum Traes_2AS_4C4190DEB I 0.000
VIT_05s0077g01240 Vitis vinifera VIT_05s0077g01240 I 0.000