Ciclev10001051m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10001051m.g T071609_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.865 0.905
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.837 0.667
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.827 0.873
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.827 0.873
estExt_Genewise1.C_2060077
M01832_2.00 		Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN		 PBM
Weirauch et al.(2014)
pTH8666 		0.820 0.730
BZIP63
M01787_2.00 		Arabidopsis thaliana
NNNWSACGTGKN
NMCACGTSWNNN		 PBM
Weirauch et al.(2014)
pTH7300 		0.789 0.683
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10001051m bZIP 261 323

Links

Other bZIP family TFs
Other Citrus clementina TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000468 Ricinus communis 29598.m000468 I 0.874
29883.m001986 Ricinus communis 29883.m001986 I 0.798
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.862
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.873
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I 0.802
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.837
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.837
BGIOSGA020738 Oryza indica BGIOSGA020738 I 0.799
BGIOSGA020743 Oryza indica BGIOSGA020743 I 0.799
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.802
Bo2g151850 Brassica oleracea Bo2g151850 I 0.793
Bo4g119810 Brassica oleracea Bo4g119810 I 0.786
Bo7g093030 Brassica oleracea Bo7g093030 I 0.820
Bo8g084770 Brassica oleracea Bo8g084770 I 0.789
Bostr.0697s0074 Boechera stricta Bostr.0697s0074 I 0.788
Bostr.25517s0001 Boechera stricta Bostr.25517s0001 I 0.788
Bra000102 Brassica rapa Bra000102 I 0.791
Bra007083 Brassica rapa Bra007083 I 0.789
Bra010010 Brassica rapa Bra010010 I 0.827
Bra014802 Brassica rapa Bra014802 I 0.786
Bra020620 Brassica rapa Bra020620 I 0.842
Bra024310 Brassica rapa Bra024310 I 0.789
BZIP25 Arabidopsis thaliana AT3G54620 I 0.788
BZIP63 Arabidopsis thaliana AT5G28770 D 0.794
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.824
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.877
Cagra.0562s0051 Capsella grandiflora Cagra.0562s0051 I 0.788
Cagra.5456s0001 Capsella grandiflora Cagra.5456s0001 I 0.789
Carubv10001450m.g Capsella rubella Carubv10001450m.g I 0.789
Carubv10017372m.g Capsella rubella Carubv10017372m.g I 0.788
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I 0.811
cassava18832.valid.m1 Manihot esculenta cassava18832.valid.m1 I 0.812
cassava18833.valid.m1 Manihot esculenta cassava18833.valid.m1 I 0.812
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.875
cassava36728.valid.m1 Manihot esculenta cassava36728.valid.m1 N 0.786
Ca_01234 Cicer arietinum Ca_01234 I 0.813
Ca_03753 Cicer arietinum Ca_03753 I 0.865
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I 0.803
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I 0.802
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.861
Cla011478 Citrullus lanatus Cla011478 I 0.834
Cla015037 Citrullus lanatus Cla015037 I 0.854
Cla020112 Citrullus lanatus Cla020112 I 0.834
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D 0.827
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.834
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.836
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.854
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I 0.848
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D 0.820
Eucgr.C03986 Eucalyptus grandis Eucgr.C03986 I 0.799
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I 0.803
EuGene.1500010323 Micromonas sp RCC299 EuGene.1500010323 I 0.783
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.845
gene08186-v1.0-hybrid Fragaria vesca gene08186-v1.0-hybrid I 0.792
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.877
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.877
GLYMA10G30410 Glycine max GLYMA10G30410 I 0.823
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.877
GLYMA20G36750 Glycine max GLYMA20G36750 I 0.823
Gorai.001G000600 Gossypium raimondii Gorai.001G000600 I 0.792
Gorai.004G075400 Gossypium raimondii Gorai.004G075400 I 0.833
Gorai.004G218300 Gossypium raimondii Gorai.004G218300 I 0.825
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.865
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I 0.802
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.850
GRMZM2G073427 Zea mays GRMZM2G073427 I 0.798
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.837
GRMZM2G103647 Zea mays GRMZM2G103647 I 0.785
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.861
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.877
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.835
gw1.189.102.1 Physcomitrella patens gw1.189.102.1 I 0.791
gw1.213.115.1 Physcomitrella patens gw1.213.115.1 I 0.796
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I 0.838
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.835
LPERR06G19690 Leersia perrieri LPERR06G19690 I 0.807
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.833
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.858
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.783
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.850
Lus10018759.g Linum usitatissimum Lus10018759.g I 0.798
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.783
MDP0000176747 Malus domestica MDP0000176747 I 0.851
MDP0000270365 Malus domestica MDP0000270365 I 0.871
mgf007535m Mimulus guttatus mgf007535m I 0.787
mgf009803m Mimulus guttatus mgf009803m I 0.874
mgf012838m Mimulus guttatus mgf012838m I 0.864
mgf013074m Mimulus guttatus mgf013074m I 0.787
MTR_1g080920 Medicago truncatula MTR_1g080920 I 0.804
MTR_7g115120 Medicago truncatula MTR_7g115120 I 0.834
OB02G14920 Oryza brachyantha OB02G14920 I 0.791
OB02G19520 Oryza brachyantha OB02G19520 I 0.791
OB06G31430 Oryza brachyantha OB06G31430 I 0.809
OB12G24740 Oryza brachyantha OB12G24740 I 0.790
OBART02G05680 Oryza barthii OBART02G05680 I 0.837
OBART02G11580 Oryza barthii OBART02G11580 I 0.837
OBART12G18120 Oryza barthii OBART12G18120 I 0.802
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.837
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.837
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.802
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.837
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.837
OMERI06G23650 Oryza meridionalis OMERI06G23650 I 0.799
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.837
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.837
ONIVA06G27820 Oryza nivara ONIVA06G27820 I 0.799
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.802
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.837
OPUNC06G21410 Oryza punctata OPUNC06G21410 I 0.799
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.833
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.877
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.861
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I 0.802
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.837
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.837
ORGLA06G0198800 Oryza glaberrima ORGLA06G0198800 I 0.799
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.837
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.837
ORUFI06G25410 Oryza rufipogon ORUFI06G25410 I 0.799
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.802
OS02G0175100 Oryza sativa OS02G0175100 I 0.837
OS02G0266800 Oryza sativa OS02G0266800 D 0.837
OS06G0662200 Oryza sativa OS06G0662200 I 0.799
OS12G0601800 Oryza sativa OS12G0601800 I 0.802
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.837
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.837
Pavir.Ca02738 Panicum virgatum Pavir.Ca02738 I 0.813
Pavir.Cb00258 Panicum virgatum Pavir.Cb00258 I 0.793
Pavir.Db00496 Panicum virgatum Pavir.Db00496 I 0.785
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.856
PDK_20s1482361g001 Phoenix dactylifera PDK_20s1482361g001 I 0.818
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.877
PK05128.1 Cannabis sativa PK05128.1 D 0.865
PK09738.1 Cannabis sativa PK09738.1 I 0.809
PK11472.1 Cannabis sativa PK11472.1 I 0.851
Pm003522 Prunus mume Pm003522 I 0.822
Pm020231 Prunus mume Pm020231 I 0.855
POPTR_0002s04660 Populus trichocarpa POPTR_0002s04660 I 0.796
POPTR_0005s05470 Populus trichocarpa POPTR_0005s05470 I 0.791
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.877
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.855
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I 0.814
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.783
SapurV1A.0006s1330 Salix purpurea SapurV1A.0006s1330 I 0.806
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.877
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.874
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.837
Sb08g020600 Sorghum bicolor Sb08g020600 I 0.818
Sb10g026450 Sorghum bicolor Sb10g026450 I 0.785
SELMODRAFT_17884 Selaginella moellendorffii SELMODRAFT_17884 I 0.801
SELMODRAFT_17886 Selaginella moellendorffii SELMODRAFT_17886 I 0.801
SELMODRAFT_270282 Selaginella moellendorffii SELMODRAFT_270282 I 0.810
SELMODRAFT_439017 Selaginella moellendorffii SELMODRAFT_439017 I 0.810
Si007043m.g Setaria italica Si007043m.g I 0.785
Si017778m.g Setaria italica Si017778m.g I 0.837
Si022331m.g Setaria italica Si022331m.g I 0.791
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.877
Solyc08g022080.2 Solanum lycopersicum Solyc08g022080.2 I 0.828
TCM_004222 Theobroma cacao TCM_004222 I 0.833
TCM_026349 Theobroma cacao TCM_026349 I 0.874
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.838
Thhalv10010426m.g Eutrema salsugineum Thhalv10010426m.g I 0.788
VIT_07s0141g00170 Vitis vinifera VIT_07s0141g00170 I 0.830