gene16561-v1.0-hybrid (Fragaria vesca)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 gene16561-v1.0-hybrid T071834_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.872 0.921
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.844 0.698
estExt_Genewise1.C_2060077
M01832_2.00 		Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN		 PBM
Weirauch et al.(2014)
pTH8666 		0.827 0.714
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.816 0.778
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.816 0.778
BZIP63
M01787_2.00 		Arabidopsis thaliana
NNNWSACGTGKN
NMCACGTSWNNN		 PBM
Weirauch et al.(2014)
pTH7300 		0.797 0.698
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna16561.1-v1.0-hybrid bZIP 227 289

Links

Other bZIP family TFs
Other Fragaria vesca TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000468 Ricinus communis 29598.m000468 I 0.881
29883.m001986 Ricinus communis 29883.m001986 I 0.806
30131.m007078 Ricinus communis 30131.m007078 I 0.785
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.869
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.880
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I 0.809
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.844
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.844
BGIOSGA020738 Oryza indica BGIOSGA020738 I 0.806
BGIOSGA020743 Oryza indica BGIOSGA020743 I 0.806
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.809
Bo2g151850 Brassica oleracea Bo2g151850 I 0.800
Bo7g093030 Brassica oleracea Bo7g093030 I 0.820
Bostr.25517s0001 Boechera stricta Bostr.25517s0001 I 0.796
Bra010010 Brassica rapa Bra010010 I 0.835
Bra020620 Brassica rapa Bra020620 I 0.849
BZIP63 Arabidopsis thaliana AT5G28770 D 0.801
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.831
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.884
Cagra.5456s0001 Capsella grandiflora Cagra.5456s0001 I 0.797
Carubv10001450m.g Capsella rubella Carubv10001450m.g I 0.797
cassava18334.valid.m1 Manihot esculenta cassava18334.valid.m1 I 0.787
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I 0.819
cassava18832.valid.m1 Manihot esculenta cassava18832.valid.m1 I 0.820
cassava18833.valid.m1 Manihot esculenta cassava18833.valid.m1 I 0.820
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.882
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.785
cassava36728.valid.m1 Manihot esculenta cassava36728.valid.m1 N 0.793
Ca_01234 Cicer arietinum Ca_01234 I 0.820
Ca_03753 Cicer arietinum Ca_03753 I 0.872
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I 0.811
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.877
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I 0.792
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.868
Cla005975 Citrullus lanatus Cla005975 I 0.785
Cla011478 Citrullus lanatus Cla011478 I 0.842
Cla015037 Citrullus lanatus Cla015037 I 0.861
Cla020112 Citrullus lanatus Cla020112 I 0.842
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D 0.816
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.842
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.843
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.861
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I 0.855
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D 0.827
Eucgr.C03986 Eucalyptus grandis Eucgr.C03986 I 0.806
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I 0.810
EuGene.1500010323 Micromonas sp RCC299 EuGene.1500010323 I 0.791
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.849
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.786
gene08757-v1.0-hybrid Fragaria vesca gene08757-v1.0-hybrid I 0.786
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.786
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.884
GLYMA10G30410 Glycine max GLYMA10G30410 I 0.831
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.884
GLYMA20G36750 Glycine max GLYMA20G36750 I 0.831
Gorai.001G000600 Gossypium raimondii Gorai.001G000600 I 0.799
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.786
Gorai.004G075400 Gossypium raimondii Gorai.004G075400 I 0.822
Gorai.004G218300 Gossypium raimondii Gorai.004G218300 I 0.814
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.872
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I 0.809
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.857
GRMZM2G073427 Zea mays GRMZM2G073427 I 0.806
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.844
GRMZM2G103647 Zea mays GRMZM2G103647 I 0.793
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.869
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.784
GSMUA_Achr1G15640_001 Musa acuminata GSMUA_Achr1G15640_001 I 0.787
GSMUA_Achr2G12610_001 Musa acuminata GSMUA_Achr2G12610_001 I 0.782
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.787
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.884
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.843
gw1.189.102.1 Physcomitrella patens gw1.189.102.1 I 0.799
gw1.213.115.1 Physcomitrella patens gw1.213.115.1 I 0.803
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I 0.845
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.842
LPERR06G19690 Leersia perrieri LPERR06G19690 I 0.814
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.840
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.865
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.791
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.857
Lus10018759.g Linum usitatissimum Lus10018759.g I 0.806
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.791
MDP0000176747 Malus domestica MDP0000176747 I 0.841
MDP0000270365 Malus domestica MDP0000270365 I 0.871
mgf007535m Mimulus guttatus mgf007535m I 0.794
mgf009803m Mimulus guttatus mgf009803m I 0.881
mgf012838m Mimulus guttatus mgf012838m I 0.871
mgf013074m Mimulus guttatus mgf013074m I 0.794
MTR_1g080920 Medicago truncatula MTR_1g080920 I 0.812
MTR_7g115120 Medicago truncatula MTR_7g115120 I 0.841
OB02G14920 Oryza brachyantha OB02G14920 I 0.799
OB02G19520 Oryza brachyantha OB02G19520 I 0.799
OB06G31430 Oryza brachyantha OB06G31430 I 0.816
OB12G24740 Oryza brachyantha OB12G24740 I 0.797
OBART02G05680 Oryza barthii OBART02G05680 I 0.844
OBART02G11580 Oryza barthii OBART02G11580 I 0.844
OBART12G18120 Oryza barthii OBART12G18120 I 0.809
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.844
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.844
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.809
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.844
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.844
OMERI06G23650 Oryza meridionalis OMERI06G23650 I 0.806
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.844
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.844
ONIVA06G27820 Oryza nivara ONIVA06G27820 I 0.806
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.809
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.844
OPUNC06G21410 Oryza punctata OPUNC06G21410 I 0.806
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.840
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.884
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.868
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I 0.792
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.844
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.844
ORGLA06G0198800 Oryza glaberrima ORGLA06G0198800 I 0.806
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.844
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.844
ORUFI06G25410 Oryza rufipogon ORUFI06G25410 I 0.806
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.809
OS02G0175100 Oryza sativa OS02G0175100 I 0.844
OS02G0266800 Oryza sativa OS02G0266800 D 0.844
OS06G0662200 Oryza sativa OS06G0662200 I 0.806
OS12G0601800 Oryza sativa OS12G0601800 I 0.809
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.844
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.844
Pavir.Ca02738 Panicum virgatum Pavir.Ca02738 I 0.821
Pavir.Cb00258 Panicum virgatum Pavir.Cb00258 I 0.801
Pavir.Db00496 Panicum virgatum Pavir.Db00496 I 0.793
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.863
PDK_20s1482361g001 Phoenix dactylifera PDK_20s1482361g001 I 0.825
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.884
PK05128.1 Cannabis sativa PK05128.1 D 0.872
PK09738.1 Cannabis sativa PK09738.1 I 0.816
PK11472.1 Cannabis sativa PK11472.1 I 0.840
Pm003522 Prunus mume Pm003522 I 0.830
Pm005087 Prunus mume Pm005087 I 0.788
Pm020231 Prunus mume Pm020231 I 0.844
POPTR_0002s04660 Populus trichocarpa POPTR_0002s04660 I 0.803
POPTR_0005s05470 Populus trichocarpa POPTR_0005s05470 I 0.798
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.884
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.844
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I 0.821
PRUPE_ppa007814mg Prunus persica PRUPE_ppa007814mg I 0.788
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.791
SapurV1A.0006s1330 Salix purpurea SapurV1A.0006s1330 I 0.814
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.884
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.882
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.844
Sb08g020600 Sorghum bicolor Sb08g020600 I 0.825
Sb10g026450 Sorghum bicolor Sb10g026450 I 0.793
SELMODRAFT_17884 Selaginella moellendorffii SELMODRAFT_17884 I 0.790
SELMODRAFT_17886 Selaginella moellendorffii SELMODRAFT_17886 I 0.790
SELMODRAFT_270282 Selaginella moellendorffii SELMODRAFT_270282 I 0.799
SELMODRAFT_439017 Selaginella moellendorffii SELMODRAFT_439017 I 0.799
Si007043m.g Setaria italica Si007043m.g I 0.793
Si017778m.g Setaria italica Si017778m.g I 0.844
Si022331m.g Setaria italica Si022331m.g I 0.798
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.884
Solyc08g022080.2 Solanum lycopersicum Solyc08g022080.2 I 0.835
TCM_004222 Theobroma cacao TCM_004222 I 0.822
TCM_026349 Theobroma cacao TCM_026349 I 0.882
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.845
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.786
VIT_07s0141g00170 Vitis vinifera VIT_07s0141g00170 I 0.837