gene21797-v1.0-hybrid (Fragaria vesca)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 gene21797-v1.0-hybrid T071839_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.791 0.882
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.791 0.882
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.791 0.882
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.791 0.882
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.791 0.882
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.791 0.863
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.791 0.863
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.791 0.863
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.791 0.863
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.791 0.863
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.791 0.863
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.791 0.863
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.791 0.863
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.791 0.843
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna21797.1-v1.0-hybrid bZIP 235 285

Links

Other bZIP family TFs
Other Fragaria vesca TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.000
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.000
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.000
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.000
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N 0.000
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.000
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N 0.000
ASU_03902 Ascaris suum ASU_03902 N 0.000
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.000
Bm4180 Brugia malayi Bm4180 N 0.000
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.000
CapteG158220 Capitella teleta CapteG158220 N 0.000
CBG17468 Caenorhabditis briggsae CBG17468 N 0.000
CBN17977 Caenorhabditis brenneri CBN17977 N 0.000
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.000
CJA09678 Caenorhabditis japonica CJA09678 N 0.000
CJA42049 Caenorhabditis japonica CJA42049 N 0.000
CRE02943 Caenorhabditis remanei CRE02943 N 0.000
csin112095 Clonorchis sinensis csin112095 N 0.000
D915_00818 Fasciola hepatica D915_00818 N 0.000
D917_01254 Trichinella nativa D917_01254 N 0.000
D917_08189 Trichinella nativa D917_08189 N 0.000
D918_07195 Trichuris suis D918_07195 N 0.000
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.000
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.000
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.000
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.000
EFV57410 Trichinella spiralis EFV57410 N 0.000
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.000
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N 0.000
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.000
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.000
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.000
GPUH_0001544201 Gongylonema pulchrum GPUH_0001544201 N 0.000
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.000
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.000
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.000
HelroG157726 Helobdella robusta HelroG157726 N 0.000
HelroG157878 Helobdella robusta HelroG157878 N 0.000
HelroG87827 Helobdella robusta HelroG87827 N 0.000
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.000
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.000
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.000
ISCW017350 Ixodes scapularis ISCW017350 N 0.000
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.000
L889_g13533 Steinernema feltiae L889_g13533 N 0.000
L892_g17551 Steinernema scapterisci L892_g17551 N 0.000
L893_g5947 Steinernema glaseri L893_g5947 N 0.000
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.000
LOAG_04936 Loa loa LOAG_04936 N 0.000
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.000
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.000
Minc01077 Meloidogyne incognita Minc01077 N 0.000
Minc03268 Meloidogyne incognita Minc03268 N 0.000
Minc08988 Meloidogyne incognita Minc08988 N 0.000
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.000
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.000
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.000
NECAME_09126 Necator americanus NECAME_09126 N 0.000
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N 0.000
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.000
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.000
PHUM006290 Pediculus humanus PHUM006290 N 0.000
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.000
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.000
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.000
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.000
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.000
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.000
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.000
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.000
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.000
SMAR013695 Strigamia maritima SMAR013695 N 0.000
Smp_000980 Schistosoma mansoni Smp_000980 N 0.000
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.000
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.000
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.000
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.000
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.000
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.000
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.000
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.000
T265_12733 Opisthorchis viverrini T265_12733 N 0.000
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.000
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.000
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N 0.000
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.000
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.000
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.000
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.000
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.000
TsM_000115400 Taenia solium TsM_000115400 N 0.000
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.000
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.000
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.000
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.000
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.000