CpipJ_CPIJ006366 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ006366 T077559_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00 		Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1 		0.813 0.939
gl
M06078_2.00 		Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618 		0.813 0.939
gl
M06079_2.00 		Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618 		0.813 0.939
gl
M06080_2.00 		Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618 		0.813 0.939
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ006366-RA C2H2 ZF 432 453
CpipJ_CPIJ006366-RA C2H2 ZF 459 481
CpipJ_CPIJ006366-RA C2H2 ZF 487 509
CpipJ_CPIJ006366-RA C2H2 ZF 515 537
CpipJ_CPIJ006366-RA C2H2 ZF 543 565

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000016663 Ailuropoda melanoleuca ENSAMEG00000016663 N
ENSSHAG00000001116 Sarcophilus harrisii ENSSHAG00000001116 N
Myotis_brandtii_ZNF827_10016913 Myotis brandtii Myotis_brandtii_ZNF827_10016913 N
Zfp827 Mus musculus ENSMUSG00000071064 N
ZNF827 Anolis carolinensis ENSACAG00000003618 N
ZNF827 Callithrix jacchus ENSCJAG00000002484 N