CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACEP13085
(
Atta cephalotes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ACEP13085
T079339_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
esg
M06050_2.00
Drosophila melanogaster
CACCTGH
DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.780
0.858
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.765
0.832
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.765
0.832
wor
M06051_2.00
Drosophila melanogaster
CACCTGY
RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.765
0.832
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY
RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.765
0.832
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACEP13085-PA
C2H2 ZF
372
394
YPCKNCTKSYSTFSGLSKHQQFH
ACEP13085-PA
C2H2 ZF
406
428
FSCKFCSKVYVSLGALKMHIRTH
ACEP13085-PA
C2H2 ZF
432
454
CKCHTCGKAFSRPWLLQGHIRTH
ACEP13085-PA
C2H2 ZF
460
482
FRCQHCNRAFADRSNLRAHLQTH
ACEP13085-PA
C2H2 ZF
488
508
YSCDRCSKTFSRMSLLTKHQD
Links
Other
C2H2 ZF
family TFs
Other
Atta cephalotes
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAG00000006882
Chlorocebus sabaeus
ENSCSAG00000006882
N
ENSNLEG00000003811
Nomascus leucogenys
ENSNLEG00000003811
N
ENSPANG00000019896
Papio anubis
ENSPANG00000019896
N
ENSPPYG00000018167
Pongo abelii
ENSPPYG00000018167
N
REPIN1
Bos taurus
ENSBTAG00000038241
N
REPIN1
Canis familiaris
ENSCAFG00000029424
N
REPIN1
Callithrix jacchus
ENSCJAG00000010483
N
REPIN1
Dasypus novemcinctus
ENSDNOG00000032100
N
REPIN1
Felis catus
ENSFCAG00000023343
N
REPIN1
Homo sapiens
ENSG00000214022
N
REPIN1
Macaca mulatta
ENSMMUG00000022633
N
REPIN1
Oryctolagus cuniculus
ENSOCUG00000004883
N
REPIN1
Otolemur garnettii
ENSOGAG00000030454
N
REPIN1
Procavia capensis
ENSPCAG00000011180
N
REPIN1
Pan troglodytes
ENSPTRG00000033818
N
REPIN1
Pteropus vampyrus
ENSPVAG00000010748
N