CGI_10027813 (Crassostrea gigas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CGI_10027813 T083621_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.783 0.850
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.764 0.805
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.764 0.805
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.764 0.805
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.764 0.805
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC40170 C2H2 ZF 225 247
EKC40170 C2H2 ZF 256 278
EKC40170 C2H2 ZF 282 304
EKC40170 C2H2 ZF 310 332
EKC40170 C2H2 ZF 338 358

Links

Other C2H2 ZF family TFs
Other Crassostrea gigas TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSACAG00000007227 Anolis carolinensis ENSACAG00000007227 I
ENSAMEG00000012681 Ailuropoda melanoleuca ENSAMEG00000012681 I
ENSBTAP00000010165-D1 Bos grunniens ENSBTAP00000010165-D1 I
ENSCPOG00000011739 Cavia porcellus ENSCPOG00000011739 I
ENSCSAG00000018321 Chlorocebus sabaeus ENSCSAG00000018321 I
ENSMPUG00000000105 Mustela putorius furo ENSMPUG00000000105 I
ENSNLEG00000010044 Nomascus leucogenys ENSNLEG00000010044 I
ENSOARG00000017137 Ovis aries ENSOARG00000017137 I
ENSP00000304985 Macaca fascicularis ENSP00000304985 I
ENSPANG00000000982 Papio anubis ENSPANG00000000982 I
ENSSHAG00000004983 Sarcophilus harrisii ENSSHAG00000004983 I
ENSSSCG00000012179 Sus scrofa ENSSSCG00000012179 I
ENSSSCG00000021322 Sus scrofa ENSSSCG00000021322 I
ENSSTOG00000007158 Ictidomys tridecemlineatus ENSSTOG00000007158 I
ENSTSYG00000005088 Tarsius syrichta ENSTSYG00000005088 I
Myotis_brandtii_ZFX_10001428 Myotis brandtii Myotis_brandtii_ZFX_10001428 I
Myotis_brandtii_ZFX_10010226 Myotis brandtii Myotis_brandtii_ZFX_10010226 I
Ogr18022 Ophisaurus gracilis Ogr18022 I
Pvit_09540 Pogona vitticeps Pvit_09540 I
ZFX Canis familiaris ENSCAFG00000013408 I
ZFX Dasypus novemcinctus ENSDNOG00000034569 I
ZFX Equus caballus ENSECAG00000025018 I
ZFX Felis catus ENSFCAG00000010544 I
ZFX Homo sapiens ENSG00000005889 D
ZFX Tursiops truncatus ENSTTRG00000012488 I
ZFX Gorilla gorilla ENSGGOG00000004053 I
ZFX Loxodonta africana ENSLAFG00000006691 I
ZFX Microcebus murinus ENSMICG00000009517 I
ZFX Macaca mulatta ENSMMUG00000009801 I
Zfx Rattus norvegicus ENSRNOG00000005624 I
ZFX Pteropus vampyrus ENSPVAG00000002534 I
ZFX Pan troglodytes ENSPTRG00000021747 I
ZFX Monodelphis domestica ENSMODG00000007512 I
ZFX Oryctolagus cuniculus ENSOCUG00000003815 I
ZFX Callithrix jacchus ENSCJAG00000004841 I
ZFX Ornithorhynchus anatinus ENSOANG00000011502 I
Zfx Mus musculus ENSMUSG00000079509 D
ZFY Myotis lucifugus ENSMLUG00000003962 I
ZFY Pan troglodytes ENSPTRG00000022471 I
ZFY Bos taurus ENSBTAG00000007730 I
ZFY Homo sapiens ENSG00000067646 I