EFV60326 (Trichinella spiralis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 EFV60326 T085759_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.796 0.884
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.796 0.884
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.796 0.884
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.794 0.899
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.794 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV60326 C2H2 ZF 230 252
EFV60326 C2H2 ZF 258 280
EFV60326 C2H2 ZF 286 308
EFV60326 C2H2 ZF 314 336
EFV60326 C2H2 ZF 342 364
EFV60326 C2H2 ZF 370 393

Links

Other C2H2 ZF family TFs
Other Trichinella spiralis TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000468 Ricinus communis 29598.m000468 I
29883.m001986 Ricinus communis 29883.m001986 I
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I
BGIOSGA006734 Oryza indica BGIOSGA006734 I
BGIOSGA007649 Oryza indica BGIOSGA007649 I
BGIOSGA020738 Oryza indica BGIOSGA020738 I
BGIOSGA020743 Oryza indica BGIOSGA020743 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I
cassava18334.valid.m1 Manihot esculenta cassava18334.valid.m1 I
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I
cassava24010.valid.m1 Manihot esculenta cassava24010.valid.m1 I
cassava36728.valid.m1 Manihot esculenta cassava36728.valid.m1 N
Ca_03753 Cicer arietinum Ca_03753 I
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
Cla011478 Citrullus lanatus Cla011478 I
Cla015037 Citrullus lanatus Cla015037 I
Cla020112 Citrullus lanatus Cla020112 I
Cla022576 Citrullus lanatus Cla022576 I
Cucsa.133290 Cucumis sativus Cucsa.133290 I
Cucsa.161540 Cucumis sativus Cucsa.161540 I
Cucsa.289120 Cucumis sativus Cucsa.289120 I
Cucsa.388800 Cucumis sativus Cucsa.388800 I
Eucgr.C03986 Eucalyptus grandis Eucgr.C03986 I
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I
gene08757-v1.0-hybrid Fragaria vesca gene08757-v1.0-hybrid I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
GLYMA03G40730 Glycine max GLYMA03G40730 I
GLYMA19G43420 Glycine max GLYMA19G43420 I
Gorai.001G000600 Gossypium raimondii Gorai.001G000600 I
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I
GRMZM2G098904 Zea mays GRMZM2G098904 I
GRMZM2G103647 Zea mays GRMZM2G103647 I
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I
LPERR02G04950 Leersia perrieri LPERR02G04950 I
LPERR06G19690 Leersia perrieri LPERR06G19690 I
Lus10006590.g Linum usitatissimum Lus10006590.g I
Lus10015913.g Linum usitatissimum Lus10015913.g I
Lus10018759.g Linum usitatissimum Lus10018759.g I
Lus10026973.g Linum usitatissimum Lus10026973.g I
mgf007535m Mimulus guttatus mgf007535m I
mgf009803m Mimulus guttatus mgf009803m I
mgf013074m Mimulus guttatus mgf013074m I
MTR_1g080920 Medicago truncatula MTR_1g080920 I
OB02G14920 Oryza brachyantha OB02G14920 I
OB02G19520 Oryza brachyantha OB02G19520 I
OB06G31430 Oryza brachyantha OB06G31430 I
OBART02G05680 Oryza barthii OBART02G05680 I
OBART02G11580 Oryza barthii OBART02G11580 I
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I
OMERI02G06470 Oryza meridionalis OMERI02G06470 I
OMERI02G12230 Oryza meridionalis OMERI02G12230 I
OMERI06G23650 Oryza meridionalis OMERI06G23650 I
ONIVA02G06040 Oryza nivara ONIVA02G06040 I
ONIVA02G12920 Oryza nivara ONIVA02G12920 I
ONIVA06G27820 Oryza nivara ONIVA06G27820 I
OPUNC02G10230 Oryza punctata OPUNC02G10230 I
OPUNC06G21410 Oryza punctata OPUNC06G21410 I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I
ORGLA06G0198800 Oryza glaberrima ORGLA06G0198800 I
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I
ORUFI06G25410 Oryza rufipogon ORUFI06G25410 I
OS02G0175100 Oryza sativa OS02G0175100 I
OS02G0266800 Oryza sativa OS02G0266800 D
OS06G0662200 Oryza sativa OS06G0662200 I
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I
Pavir.Da00268 Panicum virgatum Pavir.Da00268 N
Pavir.Db00496 Panicum virgatum Pavir.Db00496 I
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
PK05128.1 Cannabis sativa PK05128.1 D
PK09738.1 Cannabis sativa PK09738.1 I
PK11472.1 Cannabis sativa PK11472.1 I
Pm005087 Prunus mume Pm005087 I
Pm020231 Prunus mume Pm020231 I
POPTR_0006s29250 Populus trichocarpa POPTR_0006s29250 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I
Sb04g005020 Sorghum bicolor Sb04g005020 I
Sb10g026450 Sorghum bicolor Sb10g026450 I
Si007043m.g Setaria italica Si007043m.g I
Si017778m.g Setaria italica Si017778m.g I
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
TCM_026349 Theobroma cacao TCM_026349 I