ENSAMEG00000004910 (Ailuropoda melanoleuca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMEG00000004910 T086695_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF550
M07772_2.00 		Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping 		0.817 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000005178 C2H2 ZF 202 224
ENSAMEP00000005178 C2H2 ZF 230 252
ENSAMEP00000005178 C2H2 ZF 258 280
ENSAMEP00000005178 C2H2 ZF 286 311
ENSAMEP00000005178 C2H2 ZF 317 339
ENSAMEP00000005178 C2H2 ZF 345 367
ENSAMEP00000005178 C2H2 ZF 373 396
ENSAMEP00000005178 C2H2 ZF 402 424
ENSAMEP00000005178 C2H2 ZF 430 452
ENSAMEP00000005178 C2H2 ZF 458 480
ENSAMEP00000005178 C2H2 ZF 486 508
ENSAMEP00000005178 C2H2 ZF 514 536
ENSAMEP00000005178 C2H2 ZF 542 564
ENSAMEP00000005178 C2H2 ZF 570 592
ENSAMEP00000005181 C2H2 ZF 196 218
ENSAMEP00000005181 C2H2 ZF 224 246
ENSAMEP00000005181 C2H2 ZF 252 274
ENSAMEP00000005181 C2H2 ZF 280 302
ENSAMEP00000005181 C2H2 ZF 308 330
ENSAMEP00000005181 C2H2 ZF 336 358
ENSAMEP00000005181 C2H2 ZF 364 386
ENSAMEP00000005181 C2H2 ZF 392 414

Links

Other C2H2 ZF family TFs
Other Ailuropoda melanoleuca TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.000
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.000
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.000
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.000
BGIOSGA031347 Oryza indica BGIOSGA031347 N 0.000
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.000
BRADI3G34160 Brachypodium distachyon BRADI3G34160 N 0.000
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.000
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.000
Ca_11505 Cicer arietinum Ca_11505 N 0.000
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.000
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N 0.000
Cla016461 Citrullus lanatus Cla016461 N 0.000
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.000
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.000
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N 0.000
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.000
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.000
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N 0.000
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.000
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.000
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.000
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.000
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.000
GLYMA01G44430 Glycine max GLYMA01G44430 N 0.000
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.000
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.000
GLYMA11G01100 Glycine max GLYMA11G01100 N 0.000
Gorai.003G056500 Gossypium raimondii Gorai.003G056500 N 0.000
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.000
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N 0.000
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.000
Gorai.013G184000 Gossypium raimondii Gorai.013G184000 N 0.000
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.000
GRMZM2G093270 Zea mays GRMZM2G093270 N 0.000
GRMZM2G094168 Zea mays GRMZM2G094168 N 0.000
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.000
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.000
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.000
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N 0.000
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.000
LPERR10G15280 Leersia perrieri LPERR10G15280 N 0.000
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.000
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.000
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.000
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.000
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.000
mgf023930m Mimulus guttatus mgf023930m N 0.000
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.000
MTR_5g007230 Medicago truncatula MTR_5g007230 N 0.000
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.000
OB02G35810 Oryza brachyantha OB02G35810 N 0.000
OB10G26540 Oryza brachyantha OB10G26540 N 0.000
OBART02G28660 Oryza barthii OBART02G28660 N 0.000
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.000
OGLUM10G19490 Oryza glumaepatula OGLUM10G19490 N 0.000
OLONG_011823 Oryza longistaminata OLONG_011823 N 0.000
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.000
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.000
ONIVA10G22010 Oryza nivara ONIVA10G22010 N 0.000
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.000
OPUNC10G17840 Oryza punctata OPUNC10G17840 N 0.000
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N 0.000
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.000
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.000
ORGLA10G0145900 Oryza glaberrima ORGLA10G0145900 N 0.000
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.000
ORUFI10G20640 Oryza rufipogon ORUFI10G20640 N 0.000
OS02G0692700 Oryza sativa OS02G0692700 N 0.000
OS10G0574700 Oryza sativa OS10G0574700 N 0.000
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.000
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.000
Pavir.J05501 Panicum virgatum Pavir.J05501 N 0.000
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.000
Pm023220 Prunus mume Pm023220 N 0.000
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N 0.000
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.000
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.000
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.000
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.000
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N 0.000
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.000
Si035718m.g Setaria italica Si035718m.g N 0.000
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.000
Traes_1AL_791D3B325 Triticum aestivum Traes_1AL_791D3B325 N 0.000
Traes_1BL_C202F3DE1 Triticum aestivum Traes_1BL_C202F3DE1 N 0.000
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.000