CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF488
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000000536
T089766_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000020002
C2H2 ZF
255
276
CARCSRSFRLTSDLVFHMRSHH
ENSCPOP00000020002
C2H2 ZF
294
316
LTCPVCHEYFRERHHLSRHMISH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R002601
Aptenodytes forsteri
Afo_R002601
N
0.803
Alligator_sinensis_CCG009248.1
Alligator sinensis
Alligator_sinensis_CCG009248.1
N
0.779
Brh_R006725
Buceros rhinoceros
Brh_R006725
N
0.803
Cmyd_10007742
Chelonia mydas
Cmyd_10007742
N
0.803
ENSACAG00000007731
Anolis carolinensis
ENSACAG00000007731
N
0.785
ENSAMEG00000019898
Ailuropoda melanoleuca
ENSAMEG00000019898
N
0.804
ENSAPLG00000002179
Anas platyrhynchos
ENSAPLG00000002179
N
0.803
ENSFALG00000007449
Ficedula albicollis
ENSFALG00000007449
N
0.803
ENSGALG00000005975
Gallus gallus
ENSGALG00000005975
N
0.803
ENSLACG00000016046
Latimeria chalumnae
ENSLACG00000016046
N
0.803
ENSLOCG00000003895
Lepisosteus oculatus
ENSLOCG00000003895
N
0.803
ENSMODG00000025038
Monodelphis domestica
ENSMODG00000025038
N
0.803
ENSNLEG00000015447
Nomascus leucogenys
ENSNLEG00000015447
N
0.786
ENSONIG00000009552
Oreochromis niloticus
ENSONIG00000009552
N
0.803
ENSP00000379054
Macaca fascicularis
ENSP00000379054
N
0.786
ENSP00000379054-D1
Bos grunniens
ENSP00000379054-D1
N
0.804
ENSPFOG00000004161
Poecilia formosa
ENSPFOG00000004161
N
0.803
ENSSHAG00000015538
Sarcophilus harrisii
ENSSHAG00000015538
N
0.803
ENSSSCG00000010373
Sus scrofa
ENSSSCG00000010373
N
0.804
ENSSTOG00000015147
Ictidomys tridecemlineatus
ENSSTOG00000015147
N
0.786
ENSTGUG00000008050
Taeniopygia guttata
ENSTGUG00000008050
N
0.803
ENSXMAG00000014518
Xiphophorus maculatus
ENSXMAG00000014518
N
0.803
Gfo_R002431
Geospiza fortis
Gfo_R002431
N
0.803
Myotis_brandtii_ZNF488_10008743
Myotis brandtii
Myotis_brandtii_ZNF488_10008743
N
0.780
prdm8
Tetraodon nigroviridis
ENSTNIG00000016524
N
0.803
prdm8
Takifugu rubripes
ENSTRUG00000012560
N
0.803
prdm8
Oryzias latipes
ENSORLG00000008745
N
0.803
prdm8
Gasterosteus aculeatus
ENSGACG00000007142
N
0.803
ZNF488
Tupaia belangeri
ENSTBEG00000016364
N
0.786
ZNF488
Otolemur garnettii
ENSOGAG00000001742
N
0.810
ZNF488
Ornithorhynchus anatinus
ENSOANG00000015412
N
0.779
ZNF488
Myotis lucifugus
ENSMLUG00000030552
N
0.786
ZNF488
Meleagris gallopavo
ENSMGAG00000016885
N
0.803
ZNF488
Homo sapiens
ENSG00000265763
N
0.786
ZNF488
Felis catus
ENSFCAG00000008960
N
0.804
ZNF488
Equus caballus
ENSECAG00000004188
N
0.785