GLI1 (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000005414 T089838_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000004873 C2H2 ZF 236 260
ENSCPOP00000004873 C2H2 ZF 268 295
ENSCPOP00000004873 C2H2 ZF 301 325
ENSCPOP00000004873 C2H2 ZF 331 356
ENSCPOP00000004873 C2H2 ZF 362 387

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE000335 Anopheles atroparvus AATE000335 I 0.000
AATE018011 Anopheles atroparvus AATE018011 I 0.000
ACAC_0000050701 Angiostrongylus cantonensis ACAC_0000050701 I 0.000
ACEP14857 Atta cephalotes ACEP14857 I 0.000
ACOC_0000924001 Angiostrongylus costaricensis ACOC_0000924001 I 0.000
ACOM027979 Anopheles coluzzii ACOM027979 I 0.000
ACYPI31510 Acyrthosiphon pisum ACYPI31510 I 0.000
ACYPI31512 Acyrthosiphon pisum ACYPI31512 I 0.000
AFAF001557 Anopheles farauti AFAF001557 I 0.000
AFAF020264 Anopheles farauti AFAF020264 I 0.000
AMAM003778 Anopheles maculatus AMAM003778 I 0.000
AMAM009924 Anopheles maculatus AMAM009924 I 0.000
ANCCEY_04739 Ancylostoma ceylanicum ANCCEY_04739 I 0.000
ANCDUO_13968 Ancylostoma duodenale ANCDUO_13968 I 0.000
ASU_06642 Ascaris suum ASU_06642 I 0.000
BXY_0842900 Bursaphelenchus xylophilus BXY_0842900 I 0.000
CapteG130298 Capitella teleta CapteG130298 I 0.000
CBG03854 Caenorhabditis briggsae CBG03854 I 0.000
CBN09920 Caenorhabditis brenneri CBN09920 I 0.000
CBN18838 Caenorhabditis brenneri CBN18838 I 0.000
CG43689 Drosophila melanogaster FBgn0263772 I 0.000
CJA03417 Caenorhabditis japonica CJA03417 I 0.000
Cmyd_10014184 Chelonia mydas Cmyd_10014184 I 0.000
CRE08084 Caenorhabditis remanei CRE08084 I 0.000
DICVIV_01967 Dictyocaulus viviparus DICVIV_01967 I 0.000
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I 0.000
ENSBTAG00000003540 Bos taurus ENSBTAG00000003540 I 0.000
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I 0.000
ENSTGUG00000014218 Taeniopygia guttata ENSTGUG00000014218 I 0.000
EVEC_0001307101 Enterobius vermicularis EVEC_0001307101 I 0.000
GI16394 Drosophila mojavensis FBgn0139142 I 0.000
GL14771 Drosophila persimilis FBgn0152375 I 0.000
Hba_17025 Heterorhabditis bacteriophora Hba_17025 I 0.000
HelroG85268 Helobdella robusta HelroG85268 I 0.000
HHAL001110-PA Halyomorpha halys HHAL001110-PA I 0.000
ISCW018799 Ixodes scapularis ISCW018799 I 0.000
L596_g1281 Steinernema carpocapsae L596_g1281 I 0.000
L889_g28085 Steinernema feltiae L889_g28085 I 0.000
L893_g1446 Steinernema glaseri L893_g1446 I 0.000
LCUP002242 Lucilia cuprina LCUP002242 I 0.000
Minc05804 Meloidogyne incognita Minc05804 I 0.000
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.000
MYT1L Homo sapiens ENSG00000186487 I 0.000
NBR_0001165301 Nippostrongylus brasiliensis NBR_0001165301 I 0.000
nDi.2.2.2.g06992 Dirofilaria immitis nDi.2.2.2.g06992 I 0.000
NECAME_10938 Necator americanus NECAME_10938 I 0.000
nLs.2.1.2.g09672 Litomosoides sigmodontis nLs.2.1.2.g09672 I 0.000
Ocbimv22028295m.g Octopus bimaculoides Ocbimv22028295m.g I 0.000
Ocbimv22028296m.g Octopus bimaculoides Ocbimv22028296m.g N 0.000
OESDEN_24201 Oesophagostomum dentatum OESDEN_24201 I 0.000
PTRK_0001788400 Parastrongyloides trichosuri PTRK_0001788400 I 0.000
RSKR_0000214800 Rhabditophanes kr3021 RSKR_0000214800 I 0.000
Smp_168610 Schistosoma mansoni Smp_168610 N 0.000
SMU15021651 Schmidtea mediterranea SMU15021651 N 0.000
SMU15028607 Schmidtea mediterranea SMU15028607 I 0.000
SMUV_0000666101 Syphacia muris SMUV_0000666101 I 0.000
SPAL_0000489100 Strongyloides papillosus SPAL_0000489100 I 0.000
SPAL_0000892700 Strongyloides papillosus SPAL_0000892700 I 0.000
ST18 Homo sapiens ENSG00000147488 I 0.000
SVE_1935100 Strongyloides venezuelensis SVE_1935100 I 0.000
SVE_1952800 Strongyloides venezuelensis SVE_1952800 I 0.000
TELCIR_22038 Teladorsagia circumcincta TELCIR_22038 I 0.000
TELCIR_26151 Teladorsagia circumcincta TELCIR_26151 I 0.000
WBGene00238210 Onchocerca volvulus WBGene00238210 I 0.000
YQE_11977 Dendroctonus ponderosae YQE_11977 I 0.000
ztf-11 Caenorhabditis elegans WBGene00009939 D 0.000