ENSCSAVG00000009575 (Ciona savignyi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCSAVG00000009575 T090782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.798 0.896
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.798 0.896
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.798 0.896
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.798 0.896
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.798 0.896
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.798 0.896
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.793 0.896
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.793 0.896
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.793 0.896
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.793 0.896
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.793 0.896
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.793 0.896
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.793 0.896
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.793 0.896
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.793 0.896
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.775 0.861
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.775 0.861
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.775 0.861
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.775 0.861
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.775 0.861
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.775 0.861
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.775 0.861
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000016274 C2H2 ZF 567 592
ENSCSAVP00000016274 C2H2 ZF 600 627
ENSCSAVP00000016274 C2H2 ZF 633 657
ENSCSAVP00000016274 C2H2 ZF 663 688
ENSCSAVP00000016274 C2H2 ZF 694 719

Links

Other C2H2 ZF family TFs
Other Ciona savignyi TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASU_01552 Ascaris suum ASU_01552 N 0.000
Atoh8 Mus musculus ENSMUSG00000037621 N 0.000
atoh8 Xenopus tropicalis XB-GENE-877027 N 0.000
ATOH8 Tursiops truncatus ENSTTRG00000011260 N 0.000
ATOH8 Sus scrofa ENSSSCG00000008230 N 0.000
Atoh8 Rattus norvegicus ENSRNOG00000010716 N 0.000
ATOH8 Pteropus vampyrus ENSPVAG00000001652 N 0.000
ATOH8 Procavia capensis ENSPCAG00000015209 N 0.000
ATOH8 Otolemur garnettii ENSOGAG00000025987 N 0.000
ATOH8 Oryctolagus cuniculus ENSOCUG00000003528 N 0.000
ATOH8 Monodelphis domestica ENSMODG00000004038 N 0.000
ATOH8 Myotis lucifugus ENSMLUG00000011394 N 0.000
ATOH8 Microcebus murinus ENSMICG00000007934 N 0.000
ATOH8 Loxodonta africana ENSLAFG00000027790 N 0.000
atoh8 Danio rerio ENSDARG00000037555 N 0.000
ATOH8 Cavia porcellus ENSCPOG00000006364 N 0.000
ATOH8 Bos taurus ENSBTAG00000024000 N 0.000
ATOH8 Callithrix jacchus ENSCJAG00000019571 N 0.000
ATOH8 Homo sapiens ENSG00000168874 N 0.000
ATOH8 Felis catus ENSFCAG00000022157 N 0.000
ATOH8 Dasypus novemcinctus ENSDNOG00000047321 N 0.000
ENSACAG00000006693 Anolis carolinensis ENSACAG00000006693 N 0.000
ENSAMEG00000005787 Ailuropoda melanoleuca ENSAMEG00000005787 N 0.000
ENSBTAP00000032978-D1 Bos grunniens ENSBTAP00000032978-D1 N 0.000
ENSCAFG00000007657 Canis familiaris ENSCAFG00000007657 N 0.000
ENSCSAG00000016234 Chlorocebus sabaeus ENSCSAG00000016234 N 0.000
ENSECAG00000015799 Equus caballus ENSECAG00000015799 N 0.000
ENSGACG00000019554 Gasterosteus aculeatus ENSGACG00000019554 N 0.000
ENSGGOG00000023858 Gorilla gorilla ENSGGOG00000023858 N 0.000
ENSGMOG00000015329 Gadus morhua ENSGMOG00000015329 N 0.000
ENSLACG00000006436 Latimeria chalumnae ENSLACG00000006436 N 0.000
ENSLOCG00000010919 Lepisosteus oculatus ENSLOCG00000010919 N 0.000
ENSMGAG00000013108 Meleagris gallopavo ENSMGAG00000013108 N 0.000
ENSMMUG00000019558 Macaca mulatta ENSMMUG00000019558 N 0.000
ENSMPUG00000009121 Mustela putorius furo ENSMPUG00000009121 N 0.000
ENSOPRG00000010781 Ochotona princeps ENSOPRG00000010781 N 0.000
ENSP00000366553 Macaca fascicularis ENSP00000366553 N 0.000
ENSPANG00000020858 Papio anubis ENSPANG00000020858 N 0.000
ENSPFOG00000014589 Poecilia formosa ENSPFOG00000014589 N 0.000
ENSPPYG00000012219 Pongo abelii ENSPPYG00000012219 N 0.000
ENSSTOG00000006538 Ictidomys tridecemlineatus ENSSTOG00000006538 N 0.000
ENSTBEG00000008003 Tupaia belangeri ENSTBEG00000008003 N 0.000
ENSTNIG00000000721 Tetraodon nigroviridis ENSTNIG00000000721 N 0.000
ENSTRUG00000000986 Takifugu rubripes ENSTRUG00000000986 N 0.000
ENSXMAG00000019079 Xiphophorus maculatus ENSXMAG00000019079 N 0.000
ISCW011969 Ixodes scapularis ISCW011969 N 0.000
Myotis_brandtii_Atoh8_10004590 Myotis brandtii Myotis_brandtii_Atoh8_10004590 N 0.000
Ogr18256 Ophisaurus gracilis Ogr18256 N 0.000
Pvit_12640 Pogona vitticeps Pvit_12640 N 0.000