Klf9 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000033863 T101114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Klf9
M00777_2.00		 Mus musculus
NCCGTTAN
NTAACGGN		 PBM
Weirauch et al.(2013)
pTH2353		 (Direct) (Direct)
Klf9
M10345_2.00		 Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB1_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF9
M08088_2.00 		Homo sapiens
NVMCACACCCMBN
NVKGGGTGTGKBN		 ChIP-seq
Mathelier et al.(2014)
MA1107.1 		0.827 1.000
KLF9
M08880_2.00 		Homo sapiens
NGCCMCGCCCMCBBS
SVVGKGGGCGKGGCN		 Misc
Kulakovskiy et al.(2013)
KLF9_HUMAN.H11MO.0.C 		0.827 1.000
KLF13
M02903_2.00 		Homo sapiens
DDRMCACGCCCCYTTNDK
MHNAARGGGGCGTGKYHH		 SELEX
Jolma et al.(2013)
KLF13_1 		0.765 0.841
KLF13
M04537_2.00 		Homo sapiens
NRCCACRCCCMCN
NGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_eDBD_HT-SELEX 		0.765 0.841
KLF13
M04539_2.00 		Homo sapiens
NRCCACRCCCMYN
NRKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_FL_HT-SELEX 		0.765 0.841
KLF13
M04538_2.00 		Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_eDBD_Methyl-HT-SELEX 		0.765 0.841
KLF13
M04540_2.00 		Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_FL_Methyl-HT-SELEX 		0.765 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00777_2.00 C2H2 ZF 16 40
M00777_2.00 C2H2 ZF 46 70
M00777_2.00 C2H2 ZF 76 98

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000045639 C2H2 ZF 143 167
ENSMUSP00000045639 C2H2 ZF 173 197
ENSMUSP00000045639 C2H2 ZF 203 225

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI28506 Acyrthosiphon pisum ACYPI28506 N