CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PLAGL1
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000012149
T103524_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Plagl1
M00130_2.00
Mus musculus
NNNVCCCCHN
NDGGGGBNNN
PBM
Badis et al.(2009)
Plagl1_0972
0.771
0.906
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000010869
C2H2 ZF
32
54
FFCQLCGKTFLTLEKFTVHNYSH
ENSOGAP00000010869
C2H2 ZF
60
84
FKCSQPECGKAFVSRYKLMRHMATH
ENSOGAP00000010869
C2H2 ZF
90
112
HQCAHCEKTFNRKDHLKNHLQTH
ENSOGAP00000010869
C2H2 ZF
119
141
YGCEECGKKYNTMLGYKRHLALH
ENSOGAP00000010869
C2H2 ZF
184
206
HQCDHCERCFYTRKDVRRHLVVH
ENSOGAP00000010869
C2H2 ZF
212
235
FLCQFCAQRFGRKDHLTRHTKKTH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1.C_1840020
Physcomitrella patens
estExt_Genewise1.C_1840020
N
estExt_gwp_gw1.C_1340024
Physcomitrella patens
estExt_gwp_gw1.C_1340024
N
GSMUA_Achr5G15570_001
Musa acuminata
GSMUA_Achr5G15570_001
N
gw1.10.155.1
Physcomitrella patens
gw1.10.155.1
N
gw1.56.82.1
Physcomitrella patens
gw1.56.82.1
N
gw1.73.66.1
Physcomitrella patens
gw1.73.66.1
N
gw1.9.179.1
Physcomitrella patens
gw1.9.179.1
N
gw1.9.180.1
Physcomitrella patens
gw1.9.180.1
N