CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF180
(
Procavia capensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPCAG00000000120
T105640_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF180
M07614_2.00
Homo sapiens
CCSCVSBCSCCDCCHNBCCCB
VGGGVNDGGHGGSGVSBGSGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF180.RCADE.OriginalMapping
0.798
0.964
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000000111
C2H2 ZF
333
355
FECNQCGKSFSWSSHLVAHQRTH
ENSPCAP00000000111
C2H2 ZF
361
383
YECNECGKSFSRSSHLVSHQRTH
ENSPCAP00000000111
C2H2 ZF
389
411
YRCNQCGKSFSQSYVLVVHQRTH
ENSPCAP00000000111
C2H2 ZF
417
439
YECNQCGKSFRQSYKLIAHQRTH
ENSPCAP00000000111
C2H2 ZF
445
467
YECNQCGKSFIQSYKLIAHQRIH
ENSPCAP00000000111
C2H2 ZF
473
495
YECSQCGKSFSQSYKLVAHQRTH
ENSPCAP00000000111
C2H2 ZF
501
523
FECNQCGKSFSWSSQLVAHQRTH
ENSPCAP00000000111
C2H2 ZF
529
551
YECNECGKSFNRSSHLVMHQRTH
ENSPCAP00000000111
C2H2 ZF
557
579
YKCNQCGKSFSQSYVLVVHQRTH
ENSPCAP00000000111
C2H2 ZF
585
607
YECSHCGKSFRQSSCFTQHQRTH
ENSPCAP00000000111
C2H2 ZF
613
635
YECNQCGKTFSLSARLIVHQRTH
ENSPCAP00000000111
C2H2 ZF
641
663
FTCNQCGKAFINSSKLIRHQATH
Links
Other
C2H2 ZF
family TFs
Other
Procavia capensis
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cob_03688
Colletotrichum orbiculare
Cob_03688
N
e_gw1.18.1785.1
Nectria haematococca
e_gw1.18.1785.1
N
NechaG33692
Fusarium solani
NechaG33692
N
PVAR5_0891
Byssochlamys spectabilis
PVAR5_0891
N