ZNF71 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000002876 T105689_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF71
M08383_2.00 		Homo sapiens
TTKCYYTYYTYBCYYYKSCYNCYV
BRGNRGSMRRRGVRARRARRGMAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQZ8_3-10.RCADE 		0.788 0.926
ZNF71
M08267_2.00 		Homo sapiens
NAGTTTCRBTTYCY
RGRAAVYGAAACTN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF71 		0.788 0.926
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000002670 C2H2 ZF 112 134
ENSPCAP00000002670 C2H2 ZF 140 162
ENSPCAP00000002670 C2H2 ZF 168 190
ENSPCAP00000002670 C2H2 ZF 196 218
ENSPCAP00000002670 C2H2 ZF 224 246
ENSPCAP00000002670 C2H2 ZF 252 274
ENSPCAP00000002670 C2H2 ZF 280 302
ENSPCAP00000002670 C2H2 ZF 308 330
ENSPCAP00000002670 C2H2 ZF 336 358
ENSPCAP00000002670 C2H2 ZF 364 386
ENSPCAP00000002670 C2H2 ZF 392 414
ENSPCAP00000002670 C2H2 ZF 420 442
ENSPCAP00000002670 C2H2 ZF 448 470

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29938.m000611 Ricinus communis 29938.m000611 I
BGIOSGA004939 Oryza indica BGIOSGA004939 N
BGIOSGA018034 Oryza indica BGIOSGA018034 N
BRADI2G25050 Brachypodium distachyon BRADI2G25050 N
BRADI2G57200 Brachypodium distachyon BRADI2G57200 N
cassava8476.m1 Manihot esculenta cassava8476.m1 I
Ca_15055 Cicer arietinum Ca_15055 I
evm.TU.supercontig_21.63 Carica papaya evm.TU.supercontig_21.63 I
GLYMA11G01700 Glycine max GLYMA11G01700 I
GRMZM2G307152 Zea mays GRMZM2G307152 N
GSMUA_Achr10G04450_001 Musa acuminata GSMUA_Achr10G04450_001 N
GSMUA_Achr3G21790_001 Musa acuminata GSMUA_Achr3G21790_001 N
LPERR01G34250 Leersia perrieri LPERR01G34250 N
LPERR05G13420 Leersia perrieri LPERR05G13420 N
MTR_5g008790 Medicago truncatula MTR_5g008790 I
OB01G48490 Oryza brachyantha OB01G48490 N
OGLUM01G43950 Oryza glumaepatula OGLUM01G43950 N
OMERI05G14660 Oryza meridionalis OMERI05G14660 N
ONIVA01G44590 Oryza nivara ONIVA01G44590 N
ONIVA05G17560 Oryza nivara ONIVA05G17560 N
OPUNC05G14870 Oryza punctata OPUNC05G14870 N
ORGLA05G0145800 Oryza glaberrima ORGLA05G0145800 N
ORUFI01G43070 Oryza rufipogon ORUFI01G43070 N
OS01G0885900 Oryza sativa OS01G0885900 N
OS05G0420300 Oryza sativa OS05G0420300 N
Pavir.J06813 Panicum virgatum Pavir.J06813 N
Sb03g042060 Sorghum bicolor Sb03g042060 N
TRAES3BF106000020CFD_g Triticum aestivum TRAES3BF106000020CFD_g N