ZNF140 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000014332 T105955_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF140
M04621_2.00 		Homo sapiens
DRCAATTCCGCTCN
NGAGCGGAATTGYH		 SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX 		0.792 0.930
ZNF140
M08372_2.00 		Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB
VNNNNNNNNNNNDGRGCRGAATTG		 ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE 		0.792 0.930
ZNF140
M08945_2.00 		Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN
NDGGAGYRGAATTGCWRVRNHNNN		 Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C 		0.792 0.930
ZNF140
M04622_2.00 		Homo sapiens
NRCAATTCCGCTCV
BGAGCGGAATTGYN		 SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX 		0.792 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000013346 C2H2 ZF 161 183
ENSPCAP00000013346 C2H2 ZF 189 211
ENSPCAP00000013346 C2H2 ZF 217 239
ENSPCAP00000013346 C2H2 ZF 245 267
ENSPCAP00000013346 C2H2 ZF 273 295
ENSPCAP00000013346 C2H2 ZF 301 323
ENSPCAP00000013346 C2H2 ZF 329 351
ENSPCAP00000013346 C2H2 ZF 357 379
ENSPCAP00000013346 C2H2 ZF 385 407
ENSPCAP00000013346 C2H2 ZF 413 435

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10002814 Chelonia mydas Cmyd_10002814 I
ENSAMEG00000002678 Ailuropoda melanoleuca ENSAMEG00000002678 I
ENSCSAG00000006994 Chlorocebus sabaeus ENSCSAG00000006994 I
ENSMEUG00000005929 Macropus eugenii ENSMEUG00000005929 I
ENSNLEG00000003719 Nomascus leucogenys ENSNLEG00000003719 I
ENSP00000398108 Macaca fascicularis ENSP00000398108 I
ENSP00000398108-D1 Bos grunniens ENSP00000398108-D1 I
ENSPANG00000023421 Papio anubis ENSPANG00000023421 I
ENSPPYG00000018155 Pongo abelii ENSPPYG00000018155 I
ENSSTOG00000027760 Ictidomys tridecemlineatus ENSSTOG00000027760 I
Myotis_brandtii_ZNF777_10025635 Myotis brandtii Myotis_brandtii_ZNF777_10025635 I
Pvit_14802 Pogona vitticeps Pvit_14802 I
Zfp777 Mus musculus ENSMUSG00000071477 I
Zfp777 Rattus norvegicus ENSRNOG00000033639 I
ZNF777 Pteropus vampyrus ENSPVAG00000010873 I
ZNF777 Cavia porcellus ENSCPOG00000014359 I
ZNF777 Callithrix jacchus ENSCJAG00000032232 I
ZNF777 Dasypus novemcinctus ENSDNOG00000003957 I
ZNF777 Felis catus ENSFCAG00000007553 I
ZNF777 Bos taurus ENSBTAG00000002810 I
ZNF777 Tursiops truncatus ENSTTRG00000015695 I
ZNF777 Homo sapiens ENSG00000196453 D
ZNF777 Sus scrofa ENSSSCG00000016775 I
ZNF777 Myotis lucifugus ENSMLUG00000017103 I
ZNF777 Pan troglodytes ENSPTRG00000023754 I
ZNF777 Loxodonta africana ENSLAFG00000006716 I
ZNF777 Procavia capensis ENSPCAG00000003810 I
ZNF777 Canis familiaris ENSCAFG00000025145 I
ZNF777 Oryctolagus cuniculus ENSOCUG00000007975 I
ZNF777 Anolis carolinensis ENSACAG00000017661 I
ZNF777 Monodelphis domestica ENSMODG00000002329 I
ZNF777 Macaca mulatta ENSMMUG00000002497 I