ENSPFOG00000013459 (Poecilia formosa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPFOG00000013459 T106320_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.827 1.000
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.827 1.000
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.827 0.986
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.827 0.986
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.827 0.986
Sp1
M03682_2.00 		Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND		 SELEX
Nitta et al.(2015)
Sp1_1 		0.814 0.971
Sp1
M06117_2.00 		Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH		 B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378 		0.814 0.971
Sp1
M06118_2.00 		Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN		 B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378 		0.814 0.971
Sp5
M09016_2.00 		Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB
VDRDRRRVDRRGVDRDRGGMGGRG		 Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C 		0.794 0.913
SP5
M10319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP5_Q2 		0.794 0.913
Sp1
M00765_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2013)
pTH0978 		0.774 0.899
Sp1
M08963_2.00 		Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC
GSVSGRGVNGGGGGMGGRGMVGGG		 Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A 		0.774 0.899
Spps
M06159_2.00 		Drosophila melanogaster
KWDRCCMCGCCCMBH
DVKGGGCGKGGYHWM		 B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169 		0.771 0.870
Spps
M06160_2.00 		Drosophila melanogaster
BDDGCCMCGCCCMYN
NRKGGGCGKGGCHHV		 B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169 		0.771 0.870
SP1
M02921_2.00 		Homo sapiens
RCCMCDCCCMH
DKGGGHGKGGY		 SELEX
Jolma et al.(2013)
SP1_1 		0.771 0.884
SP1
M04605_2.00 		Homo sapiens
NWRRCCACGCCCMCH
DGKGGGCGTGGYYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX 		0.771 0.884
SP1
M08096_2.00 		Homo sapiens
BYCCCKCCCCY
RGGGGMGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0079.3 		0.771 0.884
SP1
M08363_2.00 		Homo sapiens
CCCHNBCYCCDCCCY
RGGGHGGRGVNDGGG		 ChIP-seq
Schmitges et al.(2016)
P08047.MEME 		0.771 0.884
SP1
M08938_2.00 		Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN
NRGGGGCGGGGCBDGGVSSSGV		 Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A 		0.771 0.884
SP1
M10294_2.00 		Homo sapiens
DSCMHGCCYH
DRGGCDKGSH		 Transfac
Matys et al.(2006)
V$SP1_01 		0.771 0.884
SP1
M10295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_02 		0.771 0.884
SP1
M10296_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_07 		0.771 0.884
SP1
M10297_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_08 		0.771 0.884
SP1
M10298_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q2_02 		0.771 0.884
SP1
M10299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q3 		0.771 0.884
SP1
M10300_2.00 		Homo sapiens
VVCCCCGCCCMBN
NVKGGGCGGGGBB		 Transfac
Matys et al.(2006)
V$SP1_Q6 		0.771 0.884
SP1
M04606_2.00 		Homo sapiens
NWRGCCMCGCCCMYH
DRKGGGCGKGGCYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX 		0.771 0.884
Sp7
M09009_2.00 		Mus musculus
VHAVCCTRTAATTW
WAATTAYAGGBTDB		 Misc
Kulakovskiy et al.(2013)
SP7_MOUSE.H11MO.0.A 		0.764 0.855
SP7
M10258_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSX_Q3 		0.764 0.855
Sp4
M01862_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2014)
pTH4998 		0.762 0.884
Sp4
M00133_2.00 		Mus musculus
HMCGCCCMYN
NRKGGGCGKD		 PBM
Badis et al.(2009)
Sp4_1011 		0.762 0.884
SP4
M02879_2.00 		Homo sapiens
NWRGCCACGCCCMCHYN
NRDGKGGGCGTGGCYWN		 SELEX
Jolma et al.(2013)
SP4_1 		0.762 0.884
Sp4
M05859_2.00 		Mus musculus
DGNYMCGCCCHNN
NNDGGGCGKRNCH		 SMiLE-seq
Isakova et al.(2017)
SP4 		0.762 0.884
SP4
M08296_2.00 		Homo sapiens
NNVGCYCCKCCYMYH
DRKRGGMGGRGCBNN		 ChIP-seq
Schmitges et al.(2016)
Q02446.MEME 		0.762 0.884
SP4
M08873_2.00 		Homo sapiens
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A 		0.762 0.884
Sp4
M08975_2.00 		Mus musculus
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B 		0.762 0.884
SP4
M10165_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q3 		0.762 0.884
SP4
M10166_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q5 		0.762 0.884
SP3
M02910_2.00 		Homo sapiens
VCCMCRCCCMY
RKGGGYGKGGB		 SELEX
Jolma et al.(2013)
SP3_1 		0.761 0.884
SP3
M04558_2.00 		Homo sapiens
NRCCACGCCCMYH
DRKGGGCGTGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_HT-SELEX 		0.761 0.884
SP3
M08920_2.00 		Homo sapiens
NBBNVSCCCCKCCCMBBBNN
NNVVVKGGGMGGGGSBNVVN		 Misc
Kulakovskiy et al.(2013)
SP3_HUMAN.H11MO.0.B 		0.761 0.884
SP3
M10263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3_01 		0.761 0.884
SP3
M10264_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3 		0.761 0.884
SP3
M04559_2.00 		Homo sapiens
NRCCMCGCCCMCH
DGKGGGCGKGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_Methyl-HT-SELEX 		0.761 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000013467 C2H2 ZF 308 332
ENSPFOP00000013467 C2H2 ZF 338 362
ENSPFOP00000013467 C2H2 ZF 368 390

Links

Other C2H2 ZF family TFs
Other Poecilia formosa TFs

587 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29646.m001068 Ricinus communis 29646.m001068 I 0.000
30068.m002661 Ricinus communis 30068.m002661 I 0.000
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.000
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.000
BGIOSGA007448 Oryza indica BGIOSGA007448 I 0.000
BGIOSGA036419 Oryza indica BGIOSGA036419 I 0.000
Bo1g005460 Brassica oleracea Bo1g005460 I 0.000
Bo4g038560 Brassica oleracea Bo4g038560 I 0.000
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.000
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.000
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.000
Bra005335 Brassica rapa Bra005335 I 0.000
Bra010572 Brassica rapa Bra010572 I 0.000
Bra011701 Brassica rapa Bra011701 I 0.000
BRADI4G39630 Brachypodium distachyon BRADI4G39630 I 0.000
BZIP16 Arabidopsis thaliana AT2G35530 D 0.000
BZIP68 Arabidopsis thaliana AT1G32150 D 0.000
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.000
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.000
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.000
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.000
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.000
cassava11837.valid.m1 Manihot esculenta cassava11837.valid.m1 I 0.000
cassava37043.valid.m1 Manihot esculenta cassava37043.valid.m1 I 0.000
cassava45491.m1 Manihot esculenta cassava45491.m1 I 0.000
Ca_01293 Cicer arietinum Ca_01293 I 0.000
Ca_11455 Cicer arietinum Ca_11455 I 0.000
Ca_15839 Cicer arietinum Ca_15839 I 0.000
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I 0.000
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I 0.000
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.000
Cla008988 Citrullus lanatus Cla008988 I 0.000
Cla014415 Citrullus lanatus Cla014415 I 0.000
Cla016502 Citrullus lanatus Cla016502 I 0.000
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.000
Cucsa.312800 Cucumis sativus Cucsa.312800 I 0.000
Cucsa.322110 Cucumis sativus Cucsa.322110 I 0.000
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.000
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.000
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I 0.000
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.000
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.000
evm.TU.supercontig_2741.1 Carica papaya evm.TU.supercontig_2741.1 I 0.000
F775_32205 Aegilops tauschii F775_32205 I 0.000
fgeneshCV_pg.C_scaffold_12000127 Chlorella vulgaris fgeneshCV_pg.C_scaffold_12000127 I 0.000
GBF1 Arabidopsis thaliana AT4G36730 D 0.000
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.000
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.000
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I 0.000
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.000
Genemark1.5055_g Coccomyxa subellipsoidea C169 Genemark1.5055_g I 0.000
GLYMA01G01740 Glycine max GLYMA01G01740 I 0.000
GLYMA01G38381 Glycine max GLYMA01G38381 I 0.000
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.000
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.000
GLYMA09G34170 Glycine max GLYMA09G34170 I 0.000
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.000
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.000
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I 0.000
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I 0.000
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.000
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.000
GRMZM2G019106 Zea mays GRMZM2G019106 I 0.000
GRMZM2G074373 Zea mays GRMZM2G074373 I 0.000
GRMZM2G088140 Zea mays GRMZM2G088140 I 0.000
GRMZM2G153144 Zea mays GRMZM2G153144 I 0.000
GSMUA_Achr4G04530_001 Musa acuminata GSMUA_Achr4G04530_001 I 0.000
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I 0.000
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I 0.000
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I 0.000
gw1.8.536.1 Micromonas pusilla gw1.8.536.1 I 0.000
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.000
IGS.gm_10_00281 Chlorella NC64A IGS.gm_10_00281 I 0.000
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I 0.000
LPERR12G05920 Leersia perrieri LPERR12G05920 I 0.000
Lus10014324.g Linum usitatissimum Lus10014324.g I 0.000
Lus10026033.g Linum usitatissimum Lus10026033.g I 0.000
MDP0000185553 Malus domestica MDP0000185553 I 0.000
MDP0000231274 Malus domestica MDP0000231274 I 0.000
MDP0000286846 Malus domestica MDP0000286846 I 0.000
mgf000639m Mimulus guttatus mgf000639m I 0.000
mgf005151m Mimulus guttatus mgf005151m I 0.000
mgf008195m Mimulus guttatus mgf008195m I 0.000
mgf008605m Mimulus guttatus mgf008605m I 0.000
mgf013375m Mimulus guttatus mgf013375m I 0.000
mgf014804m Mimulus guttatus mgf014804m I 0.000
MLOC_63066 Hordeum vulgare MLOC_63066 I 0.000
MTR_5g028850 Medicago truncatula MTR_5g028850 I 0.000
MTR_7g116890 Medicago truncatula MTR_7g116890 I 0.000
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.000
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.000
OB02G12150 Oryza brachyantha OB02G12150 I 0.000
OB12G16310 Oryza brachyantha OB12G16310 I 0.000
OBART12G06770 Oryza barthii OBART12G06770 I 0.000
OGLUM12G08090 Oryza glumaepatula OGLUM12G08090 I 0.000
OLONG_021967 Oryza longistaminata OLONG_021967 I 0.000
OMERI12G04560 Oryza meridionalis OMERI12G04560 I 0.000
ONIVA02G02170 Oryza nivara ONIVA02G02170 I 0.000
ONIVA12G06500 Oryza nivara ONIVA12G06500 I 0.000
OPUNC02G01690 Oryza punctata OPUNC02G01690 I 0.000
OPUNC12G06450 Oryza punctata OPUNC12G06450 I 0.000
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.000
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I 0.000
ORGLA02G0021500 Oryza glaberrima ORGLA02G0021500 I 0.000
ORGLA12G0063500 Oryza glaberrima ORGLA12G0063500 I 0.000
ORUFI12G07600 Oryza rufipogon ORUFI12G07600 I 0.000
OS02G0128200 Oryza sativa OS02G0128200 I 0.000
Pavir.Aa03436 Panicum virgatum Pavir.Aa03436 I 0.000
Pavir.Ab00132 Panicum virgatum Pavir.Ab00132 I 0.000
Pavir.Ca00403 Panicum virgatum Pavir.Ca00403 I 0.000
Pavir.Cb01814 Panicum virgatum Pavir.Cb01814 I 0.000
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I 0.000
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I 0.000
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.000
PDK_20s1568831g001 Phoenix dactylifera PDK_20s1568831g001 I 0.000
PDK_20s1708971g001 Phoenix dactylifera PDK_20s1708971g001 I 0.000
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.000
PGSC0003DMG400018469 Solanum tuberosum PGSC0003DMG400018469 I 0.000
PK23964.1 Cannabis sativa PK23964.1 D 0.000
Pm023132 Prunus mume Pm023132 I 0.000
Pm026586 Prunus mume Pm026586 I 0.000
POPTR_0001s01840 Populus trichocarpa POPTR_0001s01840 I 0.000
POPTR_0003s09630 Populus trichocarpa POPTR_0003s09630 I 0.000
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I 0.000
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I 0.000
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I 0.000
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.000
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I 0.000
SapurV1A.0063s0130 Salix purpurea SapurV1A.0063s0130 I 0.000
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I 0.000
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I 0.000
Sb04g002360 Sorghum bicolor Sb04g002360 I 0.000
Sb08g008300 Sorghum bicolor Sb08g008300 I 0.000
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.000
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.000
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.000
Si017637m.g Setaria italica Si017637m.g I 0.000
Si022325m.g Setaria italica Si022325m.g I 0.000
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I 0.000
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.000
Solyc08g005290.2 Solanum lycopersicum Solyc08g005290.2 I 0.000
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I 0.000
TCM_000436 Theobroma cacao TCM_000436 I 0.000
TCM_016606 Theobroma cacao TCM_016606 I 0.000
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.000
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.000
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.000
Traes_5AS_3A85F1C2C Triticum aestivum Traes_5AS_3A85F1C2C I 0.000
Traes_5BL_A5532B750 Triticum aestivum Traes_5BL_A5532B750 I 0.000
Traes_5BS_A5532B750 Triticum aestivum Traes_5BS_A5532B750 I 0.000
Traes_5DL_C794C1EEA Triticum aestivum Traes_5DL_C794C1EEA I 0.000
TRIUR3_34165 Triticum urartu TRIUR3_34165 I 0.000
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I 0.000
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I 0.000