ENSPFOG00000019294 (Poecilia formosa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPFOG00000019294 T106427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.795 0.965
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.795 0.965
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.795 0.965
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.795 0.965
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.795 0.965
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.795 0.965
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.922
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.922
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.922
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.922
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.922
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.922
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.922
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.922
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.922
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.766 0.861
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.766 0.861
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.766 0.861
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.766 0.861
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.766 0.861
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.766 0.861
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.766 0.861
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000019415 C2H2 ZF 493 518
ENSPFOP00000019415 C2H2 ZF 526 553
ENSPFOP00000019415 C2H2 ZF 559 583
ENSPFOP00000019415 C2H2 ZF 589 614
ENSPFOP00000019415 C2H2 ZF 620 645
ENSPFOP00000022302 C2H2 ZF 491 516
ENSPFOP00000022302 C2H2 ZF 524 551
ENSPFOP00000022302 C2H2 ZF 557 581
ENSPFOP00000022302 C2H2 ZF 587 612
ENSPFOP00000022302 C2H2 ZF 618 643

Links

Other C2H2 ZF family TFs
Other Poecilia formosa TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002369 Ricinus communis 29729.m002369 I 0.000
29915.m000479 Ricinus communis 29915.m000479 I 0.000
30169.m006533 Ricinus communis 30169.m006533 I 0.000
30174.m008651 Ricinus communis 30174.m008651 I 0.000
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.000
Aquca_013_00135 Aquilegia coerulea Aquca_013_00135 I 0.000
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.000
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.000
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.000
Bo00913s010 Brassica oleracea Bo00913s010 I 0.000
Bo3g035130 Brassica oleracea Bo3g035130 I 0.000
Bo3g035140 Brassica oleracea Bo3g035140 I 0.000
Bo4g012750 Brassica oleracea Bo4g012750 I 0.000
Bo4g190380 Brassica oleracea Bo4g190380 I 0.000
Bo4g190390 Brassica oleracea Bo4g190390 I 0.000
Bo6g071110 Brassica oleracea Bo6g071110 I 0.000
Bo8g090820 Brassica oleracea Bo8g090820 I 0.000
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.000
Bostr.9345s0060 Boechera stricta Bostr.9345s0060 I 0.000
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.000
Bra000202 Brassica rapa Bra000202 I 0.000
Bra000203 Brassica rapa Bra000203 I 0.000
Bra003239 Brassica rapa Bra003239 I 0.000
Bra004586 Brassica rapa Bra004586 I 0.000
Bra007243 Brassica rapa Bra007243 I 0.000
Bra014692 Brassica rapa Bra014692 I 0.000
Bra016974 Brassica rapa Bra016974 I 0.000
Bra016975 Brassica rapa Bra016975 I 0.000
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.000
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.000
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.000
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.000
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.000
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.000
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.000
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.000
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.000
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.000
cassava36814.valid.m1 Manihot esculenta cassava36814.valid.m1 I 0.000
cassava36815.valid.m1 Manihot esculenta cassava36815.valid.m1 I 0.000
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.000
cassava7221.valid.m1 Manihot esculenta cassava7221.valid.m1 I 0.000
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.000
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.000
Ca_04100 Cicer arietinum Ca_04100 I 0.000
Ca_09495 Cicer arietinum Ca_09495 I 0.000
Ca_12915 Cicer arietinum Ca_12915 I 0.000
Ca_18932 Cicer arietinum Ca_18932 I 0.000
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I 0.000
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.000
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.000
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.000
Cla007424 Citrullus lanatus Cla007424 I 0.000
Cla015244 Citrullus lanatus Cla015244 I 0.000
Cla018337 Citrullus lanatus Cla018337 I 0.000
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.000
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.000
Eucgr.D02359 Eucalyptus grandis Eucgr.D02359 I 0.000
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.000
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.000
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.000
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.000
evm.TU.contig_32256 Carica papaya evm.TU.contig_32256 I 0.000
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.000
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.000
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.000
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.000
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.000
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.000
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.000
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.000
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.000
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.000
GLYMA05G29921 Glycine max GLYMA05G29921 I 0.000
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.000
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.000
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.000
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.000
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.000
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.000
GLYMA14G36438 Glycine max GLYMA14G36438 I 0.000
GLYMA14G36446 Glycine max GLYMA14G36446 I 0.000
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.000
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.000
GLYMA19G44380 Glycine max GLYMA19G44380 I 0.000
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.000
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.000
Gorai.007G107300 Gossypium raimondii Gorai.007G107300 I 0.000
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.000
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.000
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.000
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.000
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.000
GSMUA_Achr6G05710_001 Musa acuminata GSMUA_Achr6G05710_001 I 0.000
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.000
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.000
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.000
Lus10012870.g Linum usitatissimum Lus10012870.g I 0.000
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.000
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.000
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.000
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.000
Lus10029022.g Linum usitatissimum Lus10029022.g I 0.000
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.000
Lus10034244.g Linum usitatissimum Lus10034244.g I 0.000
MDP0000175240 Malus domestica MDP0000175240 I 0.000
MDP0000754989 Malus domestica MDP0000754989 I 0.000
MDP0000828055 Malus domestica MDP0000828055 I 0.000
mgf002542m Mimulus guttatus mgf002542m I 0.000
mgf009193m Mimulus guttatus mgf009193m I 0.000
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.000
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.000
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.000
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.000
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.000
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.000
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.000
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.000
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.000
MTR_8g027860 Medicago truncatula MTR_8g027860 I 0.000
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.000
OBART03G16400 Oryza barthii OBART03G16400 I 0.000
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.000
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.000
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.000
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.000
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.000
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.000
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.000
OS03G0335200 Oryza sativa OS03G0335200 I 0.000
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.000
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.000
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.000
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.000
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.000
PDK_20s1571901g001 Phoenix dactylifera PDK_20s1571901g001 I 0.000
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.000
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.000
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.000
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.000
PK03324.1 Cannabis sativa PK03324.1 I 0.000
PK21378.1 Cannabis sativa PK21378.1 I 0.000
Pm003013 Prunus mume Pm003013 I 0.000
Pm003014 Prunus mume Pm003014 I 0.000
Pm003015 Prunus mume Pm003015 I 0.000
Pm019286 Prunus mume Pm019286 I 0.000
POPTR_0002s17010 Populus trichocarpa POPTR_0002s17010 I 0.000
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.000
POPTR_0012s01380 Populus trichocarpa POPTR_0012s01380 I 0.000
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.000
POPTR_0014s09190 Populus trichocarpa POPTR_0014s09190 I 0.000
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.000
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.000
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.000
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.000
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.000
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.000
SapurV1A.0190s0060 Salix purpurea SapurV1A.0190s0060 I 0.000
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.000
SapurV1A.0377s0020 Salix purpurea SapurV1A.0377s0020 I 0.000
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.000
SapurV1A.1043s0030 Salix purpurea SapurV1A.1043s0030 I 0.000
SapurV1A.2295s0010 Salix purpurea SapurV1A.2295s0010 I 0.000
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.000
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.000
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.000
Si012735m.g Setaria italica Si012735m.g I 0.000
Si022702m.g Setaria italica Si022702m.g I 0.000
Si030531m.g Setaria italica Si030531m.g I 0.000
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.000
Solyc05g050330.2 Solanum lycopersicum Solyc05g050330.2 I 0.000
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.000
TCM_005179 Theobroma cacao TCM_005179 I 0.000
TCM_006103 Theobroma cacao TCM_006103 I 0.000
TCM_006116 Theobroma cacao TCM_006116 I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
TCM_045556 Theobroma cacao TCM_045556 I 0.000
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.000
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.000
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.000
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.000
VIT_15s0046g01140 Vitis vinifera VIT_15s0046g01140 I 0.000
WRKY55 Arabidopsis thaliana AT2G40740 D 0.000
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.000
WRKY70 Arabidopsis thaliana AT3G56400 D 0.000
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.000