GLI1 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000012109 T108694_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000011411 C2H2 ZF 236 260
ENSPVAP00000011411 C2H2 ZF 268 295
ENSPVAP00000011411 C2H2 ZF 301 325
ENSPVAP00000011411 C2H2 ZF 331 356
ENSPVAP00000011411 C2H2 ZF 362 387

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R013762 Aptenodytes forsteri Afo_R013762 I 0.000
Alligator_sinensis_CCG016192.1 Alligator sinensis Alligator_sinensis_CCG016192.1 I 0.000
Brh_R009093 Buceros rhinoceros Brh_R009093 I 0.000
Cmyd_10017123 Chelonia mydas Cmyd_10017123 I 0.000
ENSCPOG00000010372 Cavia porcellus ENSCPOG00000010372 I 0.000
ENSCSAG00000019713 Chlorocebus sabaeus ENSCSAG00000019713 I 0.000
ENSFALG00000002014 Ficedula albicollis ENSFALG00000002014 I 0.000
ENSMICG00000003244 Microcebus murinus ENSMICG00000003244 I 0.000
ENSNLEG00000017214 Nomascus leucogenys ENSNLEG00000017214 I 0.000
ENSOARG00000019166 Ovis aries ENSOARG00000019166 I 0.000
ENSP00000362763 Macaca fascicularis ENSP00000362763 I 0.000
ENSP00000362763-D1 Bos grunniens ENSP00000362763-D1 I 0.000
ENSPANG00000016323 Papio anubis ENSPANG00000016323 I 0.000
ENSPPYG00000019584 Pongo abelii ENSPPYG00000019584 I 0.000
ENSPSIG00000001016 Pelodiscus sinensis ENSPSIG00000001016 I 0.000
ENSSHAG00000008092 Sarcophilus harrisii ENSSHAG00000008092 I 0.000
ENSSTOG00000010670 Ictidomys tridecemlineatus ENSSTOG00000010670 I 0.000
Gfo_R007918 Geospiza fortis Gfo_R007918 I 0.000
Myotis_brandtii_ZBTB6_10028432 Myotis brandtii Myotis_brandtii_ZBTB6_10028432 I 0.000
Ogr13906 Ophisaurus gracilis Ogr13906 I 0.000
Pvit_08507 Pogona vitticeps Pvit_08507 I 0.000
Tal_R000026 Tyto alba Tal_R000026 I 0.000
ZBTB26 Oryctolagus cuniculus ENSOCUG00000008815 I 0.000
ZBTB6 Sus scrofa ENSSSCG00000005576 I 0.000
zbtb6 Xenopus tropicalis XB-GENE-5823898 I 0.000
ZBTB6 Sorex araneus ENSSARG00000012333 I 0.000
ZBTB6 Taeniopygia guttata ENSTGUG00000006932 I 0.000
ZBTB6 Tursiops truncatus ENSTTRG00000016956 I 0.000
ZBTB6 Vicugna pacos ENSVPAG00000005997 I 0.000
ZBTB6 Bos taurus ENSBTAG00000039815 I 0.000
ZBTB6 Gorilla gorilla ENSGGOG00000014555 I 0.000
ZBTB6 Canis familiaris ENSCAFG00000032570 I 0.000
ZBTB6 Choloepus hoffmanni ENSCHOG00000013771 I 0.000
ZBTB6 Callithrix jacchus ENSCJAG00000020049 I 0.000
ZBTB6 Dasypus novemcinctus ENSDNOG00000014591 I 0.000
ZBTB6 Equus caballus ENSECAG00000002222 I 0.000
ZBTB6 Erinaceus europaeus ENSEEUG00000013087 I 0.000
ZBTB6 Echinops telfairi ENSETEG00000009867 I 0.000
ZBTB6 Homo sapiens ENSG00000186130 D 0.000
ZBTB6 Gallus gallus ENSGALG00000021570 I 0.000
Zbtb6 Rattus norvegicus ENSRNOG00000009340 I 0.000
ZBTB6 Meleagris gallopavo ENSMGAG00000008047 I 0.000
ZBTB6 Myotis lucifugus ENSMLUG00000014003 I 0.000
ZBTB6 Macaca mulatta ENSMMUG00000000496 I 0.000
ZBTB6 Monodelphis domestica ENSMODG00000023551 I 0.000
Zbtb6 Mus musculus ENSMUSG00000066798 I 0.000
ZBTB6 Otolemur garnettii ENSOGAG00000010682 I 0.000
ZBTB6 Pan troglodytes ENSPTRG00000021340 I 0.000
ZBTB6 Pteropus vampyrus ENSPVAG00000017594 I 0.000