CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLI4
(
Pteropus vampyrus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPVAG00000024242
T108846_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLI4
M08394_2.00
Homo sapiens
TKRNCNTGGCATTCAAGGCYY
RRGCCTTGAATGCCANGNYMA
ChIP-seq
Schmitges et al.(2016)
P10075.MEME
0.802
0.944
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000016984
C2H2 ZF
185
207
HRCEACGKSFKYNSLLLKHQRIH
ENSPVAP00000016984
C2H2 ZF
213
235
YACAECGKRFRGWSGFIQHHRIH
ENSPVAP00000016984
C2H2 ZF
241
263
YECAECGRAFSHSSHFTQHLRTH
ENSPVAP00000016984
C2H2 ZF
269
291
YECGECGQAFSQSSNLVRHQRLH
ENSPVAP00000016984
C2H2 ZF
297
319
YACSQCGKAFIWSSVLIEHQRIH
ENSPVAP00000016984
C2H2 ZF
325
347
YECADCGRAFRGRSHFFRHLRAH
ENSPVAP00000016984
C2H2 ZF
353
375
FSCGACGKAFGQSSQLIQHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Pteropus vampyrus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000010458
Ailuropoda melanoleuca
ENSAMEG00000010458
I
0.790
ENSCSAG00000009125
Chlorocebus sabaeus
ENSCSAG00000009125
I
0.801
ENSMPUG00000008492
Mustela putorius furo
ENSMPUG00000008492
I
0.791
ENSPPYG00000018931
Pongo abelii
ENSPPYG00000018931
I
0.803
ENSSSCG00000006960
Sus scrofa
ENSSSCG00000006960
I
0.787
ENSSTOG00000023930
Ictidomys tridecemlineatus
ENSSTOG00000023930
I
0.802
GLI4
Canis familiaris
ENSCAFG00000029287
I
0.793
GLI4
Dasypus novemcinctus
ENSDNOG00000001356
I
0.801
GLI4
Homo sapiens
ENSG00000250571
D
0.802
GLI4
Monodelphis domestica
ENSMODG00000011659
I
0.756
GLI4
Procavia capensis
ENSPCAG00000018803
I
0.774
GLI4
Pan troglodytes
ENSPTRG00000020650
I
0.803
GLI4
Tursiops truncatus
ENSTTRG00000021363
I
0.808