Glis2 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000004766 T108895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Glis2
M00129_2.00 		Mus musculus
NKACCCCYYNN
NNRRGGGGTMN		 PBM
Badis et al.(2009)
Glis2_1757 		0.827 1.000
GLIS2
M02887_2.00 		Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM		 SELEX
Jolma et al.(2013)
GLIS2_1 		0.827 0.986
GLIS2
M04449_2.00 		Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY		 SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX 		0.827 0.986
GLIS2
M04450_2.00 		Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH		 SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX 		0.827 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000006680 C2H2 ZF 235 257
ENSRNOP00000006680 C2H2 ZF 263 287
ENSRNOP00000006680 C2H2 ZF 293 317

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G38490 Arabidopsis thaliana AT5G38490 N
Cagra.4497s0010 Capsella grandiflora Cagra.4497s0010 N
Carubv10007011m.g Capsella rubella Carubv10007011m.g N
fgenesh1_pm.C_scaffold_7002839 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7002839 N
scaffold_701550.1 Arabidopsis lyrata scaffold_701550.1 N
scaffold_704219.1 Arabidopsis lyrata scaffold_704219.1 N