CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Repin1
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000008239
T108938_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000011032
C2H2 ZF
109
130
HRCAHCRKRFPGWVALWLHTRR
ENSRNOP00000011032
C2H2 ZF
137
159
LPCHECNQRFRHAPFLALHLQVH
ENSRNOP00000011032
C2H2 ZF
168
190
FICHLCGHSFRGWVALVLHLRAH
ENSRNOP00000011032
C2H2 ZF
197
218
ITCPECNKRFWRQKQLRAHLRR
ENSRNOP00000011032
C2H2 ZF
229
251
FICGNCGRSFAQWDQLVVHKRVH
ENSRNOP00000011032
C2H2 ZF
288
310
FQCACCGKRFRHKPNLIAHRRVH
ENSRNOP00000011032
C2H2 ZF
316
338
HQCPECGKRFTNKPYLTSHRRIH
ENSRNOP00000011032
C2H2 ZF
344
366
YPCTECGRRFRHKPNLLSHSKIH
ENSRNOP00000011032
C2H2 ZF
412
434
HSCTDCGRSFRLERFLRLHQRQH
ENSRNOP00000011032
C2H2 ZF
440
462
FTCTECGKNFGKKTHLVAHSRVH
ENSRNOP00000011032
C2H2 ZF
468
490
FACEECGRRFSQGSHLAAHRRDH
ENSRNOP00000011032
C2H2 ZF
496
518
FVCPDCGKAFRHKPYLAAHRRIH
ENSRNOP00000011032
C2H2 ZF
524
546
YVCPDCGKAFSQKSNLVSHRRIH
ENSRNOP00000011032
C2H2 ZF
552
574
YACPDCDRSFSQKSNLITHRKSH
ENSRNOP00000011032
C2H2 ZF
580
602
FCCAICGQTFDDEDRLLMHQKKH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R004750
Calypte anna
Aan_R004750
N
Afo_R014155
Aptenodytes forsteri
Afo_R014155
N
Alligator_sinensis_CCG016799.1
Alligator sinensis
Alligator_sinensis_CCG016799.1
N
Brh_R000426
Buceros rhinoceros
Brh_R000426
N
ENSAPLG00000007311
Anas platyrhynchos
ENSAPLG00000007311
N
ENSFALG00000004005
Ficedula albicollis
ENSFALG00000004005
N
ENSPSIG00000003246
Pelodiscus sinensis
ENSPSIG00000003246
N
Gfo_R008521
Geospiza fortis
Gfo_R008521
N
Ogr04055
Ophisaurus gracilis
Ogr04055
N
Pvit_08921
Pogona vitticeps
Pvit_08921
N
Tal_R004476
Tyto alba
Tal_R004476
N
ZNF711
Monodelphis domestica
ENSMODG00000014346
N
ZNF711
Taeniopygia guttata
ENSTGUG00000002466
N