CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfpm1
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000043077
T109242_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000061082
C2H2 ZF
255
276
FPCKDCGIWYRSERNLQAHLLY
ENSRNOP00000061082
C2H2 ZF
304
327
ICPFPQCRKSCPSASSLEIHMRSH
ENSRNOP00000061082
C2H2 ZF
333
355
FVCLICLSAFTTKANCERHLKVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000945701
Angiostrongylus cantonensis
ACAC_0000945701
N
ANCCAN_18878
Ancylostoma caninum
ANCCAN_18878
I
ANCDUO_21609
Ancylostoma duodenale
ANCDUO_21609
I
ASIM_0001398401
Anisakis simplex
ASIM_0001398401
N
Bm6553
Brugia malayi
Bm6553
N
BXY_0367500
Bursaphelenchus xylophilus
BXY_0367500
N
CBG05538
Caenorhabditis briggsae
CBG05538
I
CGOC_0000345301
Cylicostephanus goldi
CGOC_0000345301
I
DME_0000033301
Dracunculus medinensis
DME_0000033301
N
GPUH_0001120501
Gongylonema pulchrum
GPUH_0001120501
N
L889_g9935
Steinernema feltiae
L889_g9935
N
L892_g11291
Steinernema scapterisci
L892_g11291
N
L893_g17711
Steinernema glaseri
L893_g17711
N
L898_g18025
Steinernema monticolum
L898_g18025
N
nDi.2.2.2.g11238
Dirofilaria immitis
nDi.2.2.2.g11238
I
nLs.2.1.2.g08792
Litomosoides sigmodontis
nLs.2.1.2.g08792
N
OFLC_0000276401
Onchocerca flexuosa
OFLC_0000276401
N
PPA12559
Pristionchus pacificus
PPA12559
N
PTRK_0001041600
Parastrongyloides trichosuri
PTRK_0001041600
N
RSKR_0000031900
Rhabditophanes kr3021
RSKR_0000031900
N
SPAL_0000348500
Strongyloides papillosus
SPAL_0000348500
N
SVE_0177100
Strongyloides venezuelensis
SVE_0177100
N
TCLT_0000958101
Thelazia callipaeda
TCLT_0000958101
N
WBGene00242919
Onchocerca volvulus
WBGene00242919
N
WUBG_06876
Wuchereria bancrofti
WUBG_06876
N