CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000012856
(
Tarsius syrichta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTSYG00000012856
T112866_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF180
M07614_2.00
Homo sapiens
CCSCVSBCSCCDCCHNBCCCB
VGGGVNDGGHGGSGVSBGSGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF180.RCADE.OriginalMapping
0.801
0.971
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000011789
C2H2 ZF
352
374
FECNQCGKSFSWSSHLVAHQRTH
ENSTSYP00000011789
C2H2 ZF
380
402
YECNECGKSFSRSSHLVSHQRTH
ENSTSYP00000011789
C2H2 ZF
408
430
YRCNQCGKSFSQSYVLVVHQRTH
ENSTSYP00000011789
C2H2 ZF
436
458
YECNQCGKSFRQSYKLIAHQRTH
ENSTSYP00000011789
C2H2 ZF
464
486
YECNQCGKSFIQSYKLIAHQRIH
ENSTSYP00000011789
C2H2 ZF
492
514
YECDQCGKSFSQSYKLVAHQRTH
ENSTSYP00000011789
C2H2 ZF
520
542
FECNQCGKSFSWSSQLVAHQRTH
ENSTSYP00000011789
C2H2 ZF
548
570
YECNECGKSFNRSSHLVMHQRTH
ENSTSYP00000011789
C2H2 ZF
576
598
YECNQCGKSFSQSYVLVVHQRTH
ENSTSYP00000011789
C2H2 ZF
604
626
YECSQCGKSFRQSSCLTQHQRTH
ENSTSYP00000011789
C2H2 ZF
632
654
YECNQCGKTFSLSARLIVHQRTH
ENSTSYP00000011789
C2H2 ZF
660
682
FTCNQCGKAFINSSKLIRHQSTH
Links
Other
C2H2 ZF
family TFs
Other
Tarsius syrichta
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000006596
Astyanax mexicanus
ENSAMXG00000006596
N
ENSAMXG00000010401
Astyanax mexicanus
ENSAMXG00000010401
N
ENSGMOG00000008935
Gadus morhua
ENSGMOG00000008935
N
ENSGMOG00000018159
Gadus morhua
ENSGMOG00000018159
N
ENSLOCG00000004823
Lepisosteus oculatus
ENSLOCG00000004823
N
ENSONIG00000001964
Oreochromis niloticus
ENSONIG00000001964
N
ENSONIG00000006414
Oreochromis niloticus
ENSONIG00000006414
N
ENSPFOG00000019322
Poecilia formosa
ENSPFOG00000019322
N
ENSXMAG00000000596
Xiphophorus maculatus
ENSXMAG00000000596
N
vezf1a
Danio rerio
ENSDARG00000008247
N
vezf1a
Gasterosteus aculeatus
ENSGACG00000020304
N
vezf1a
Oryzias latipes
ENSORLG00000009698
N
vezf1a
Tetraodon nigroviridis
ENSTNIG00000011836
N
vezf1a
Takifugu rubripes
ENSTRUG00000011480
N
vezf1b
Danio rerio
ENSDARG00000061030
N
vezf1b
Gasterosteus aculeatus
ENSGACG00000000419
N