ovo (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0003028 T114405_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ovo
M02671_2.00		 Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1		 (Direct) (Direct)
ovo
M03669_2.00		 Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1		 (Direct) (Direct)
ovo
M06064_2.00		 Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028		 (Direct) (Direct)
ovo
M06065_2.00		 Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028		 (Direct) (Direct)
ovo
M06066_2.00		 Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028		 (Direct) (Direct)
ovo
M09662_2.00		 Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo		 (Direct) (Direct)
ovo
M10373_2.00		 Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01		 (Direct) (Direct)
ovo
M10374_2.00		 Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.790 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0070706 C2H2 ZF 1197 1219
FBpp0070706 C2H2 ZF 1225 1247
FBpp0070706 C2H2 ZF 1253 1276
FBpp0070707 C2H2 ZF 1068 1090
FBpp0070707 C2H2 ZF 1096 1118
FBpp0070707 C2H2 ZF 1124 1147
FBpp0070708 C2H2 ZF 821 843
FBpp0070708 C2H2 ZF 849 871
FBpp0070708 C2H2 ZF 877 900
FBpp0099822 C2H2 ZF 874 896
FBpp0099822 C2H2 ZF 902 924
FBpp0099822 C2H2 ZF 930 953
FBpp0291128 C2H2 ZF 1197 1219
FBpp0291128 C2H2 ZF 1225 1247
FBpp0291128 C2H2 ZF 1253 1276

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30068.m002661 Ricinus communis 30068.m002661 I
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I
AMTR_s00138p00062920 Amborella trichopoda AMTR_s00138p00062920 I
BGIOSGA007448 Oryza indica BGIOSGA007448 I
BGIOSGA036419 Oryza indica BGIOSGA036419 I
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I
BRADI3G02730 Brachypodium distachyon BRADI3G02730 I
BRADI4G39630 Brachypodium distachyon BRADI4G39630 I
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I
BZIP68 Arabidopsis thaliana AT1G32150 D
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I
cassava11837.valid.m1 Manihot esculenta cassava11837.valid.m1 I
cassava37043.valid.m1 Manihot esculenta cassava37043.valid.m1 I
Ca_11455 Cicer arietinum Ca_11455 I
Ca_15839 Cicer arietinum Ca_15839 I
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I
Cla008988 Citrullus lanatus Cla008988 I
Cla016502 Citrullus lanatus Cla016502 I
Cucsa.312800 Cucumis sativus Cucsa.312800 I
Cucsa.322110 Cucumis sativus Cucsa.322110 I
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I
evm.TU.supercontig_2741.1 Carica papaya evm.TU.supercontig_2741.1 I
F775_32205 Aegilops tauschii F775_32205 I
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I
GLYMA01G01740 Glycine max GLYMA01G01740 I
GLYMA08G34280 Glycine max GLYMA08G34280 I
GLYMA09G34170 Glycine max GLYMA09G34170 I
GLYMA16G15810 Glycine max GLYMA16G15810 I
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I
GRMZM2G019106 Zea mays GRMZM2G019106 I
GRMZM2G074373 Zea mays GRMZM2G074373 I
GRMZM2G088140 Zea mays GRMZM2G088140 I
GRMZM2G153144 Zea mays GRMZM2G153144 I
HBP1A_WHEAT Triticum aestivum HBP1A_WHEAT D
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I
LPERR12G05920 Leersia perrieri LPERR12G05920 I
MDP0000185553 Malus domestica MDP0000185553 I
MDP0000286846 Malus domestica MDP0000286846 I
mgf008195m Mimulus guttatus mgf008195m I
mgf008605m Mimulus guttatus mgf008605m I
mgf013375m Mimulus guttatus mgf013375m I
MLOC_63066 Hordeum vulgare MLOC_63066 I
MTR_5g028850 Medicago truncatula MTR_5g028850 I
OB02G12150 Oryza brachyantha OB02G12150 I
OB12G16310 Oryza brachyantha OB12G16310 I
OBART12G06770 Oryza barthii OBART12G06770 I
OGLUM12G08090 Oryza glumaepatula OGLUM12G08090 I
OLONG_021967 Oryza longistaminata OLONG_021967 I
OMERI12G04560 Oryza meridionalis OMERI12G04560 I
ONIVA02G02170 Oryza nivara ONIVA02G02170 I
ONIVA12G06500 Oryza nivara ONIVA12G06500 I
OPUNC02G01690 Oryza punctata OPUNC02G01690 I
OPUNC12G06450 Oryza punctata OPUNC12G06450 I
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I
ORGLA02G0021500 Oryza glaberrima ORGLA02G0021500 I
ORGLA12G0063500 Oryza glaberrima ORGLA12G0063500 I
ORUFI12G07600 Oryza rufipogon ORUFI12G07600 I
OS02G0128200 Oryza sativa OS02G0128200 I
Pavir.Aa03436 Panicum virgatum Pavir.Aa03436 I
Pavir.Ab00132 Panicum virgatum Pavir.Ab00132 I
Pavir.Ca00403 Panicum virgatum Pavir.Ca00403 I
Pavir.Cb01814 Panicum virgatum Pavir.Cb01814 I
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I
PDK_20s1568831g001 Phoenix dactylifera PDK_20s1568831g001 I
PGSC0003DMG400018469 Solanum tuberosum PGSC0003DMG400018469 I
PK23964.1 Cannabis sativa PK23964.1 D
Pm023132 Prunus mume Pm023132 I
POPTR_0001s01840 Populus trichocarpa POPTR_0001s01840 I
POPTR_0003s09630 Populus trichocarpa POPTR_0003s09630 I
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I
SapurV1A.0063s0130 Salix purpurea SapurV1A.0063s0130 I
Sb04g002360 Sorghum bicolor Sb04g002360 I
Sb08g008300 Sorghum bicolor Sb08g008300 I
Si017637m.g Setaria italica Si017637m.g I
Si022325m.g Setaria italica Si022325m.g I
Solyc08g005290.2 Solanum lycopersicum Solyc08g005290.2 I
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I
TCM_016606 Theobroma cacao TCM_016606 I
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I
Traes_5AS_3A85F1C2C Triticum aestivum Traes_5AS_3A85F1C2C I
Traes_5BL_A5532B750 Triticum aestivum Traes_5BL_A5532B750 I
Traes_5BS_A5532B750 Triticum aestivum Traes_5BS_A5532B750 I
Traes_5DL_C794C1EEA Triticum aestivum Traes_5DL_C794C1EEA I
Traes_6BS_05264DAEA Triticum aestivum Traes_6BS_05264DAEA I
TRIUR3_18117 Triticum urartu TRIUR3_18117 I
TRIUR3_34165 Triticum urartu TRIUR3_34165 I
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I