GA28112 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0249475 T117200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.825 0.989
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.825 0.989
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.825 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0285853 C2H2 ZF 76 98
FBpp0285853 C2H2 ZF 104 126
FBpp0285853 C2H2 ZF 144 166
FBpp0285853 C2H2 ZF 172 195

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000869 Aedes aegypti AAEL000869 I 0.807
AATE011452 Anopheles atroparvus AATE011452 I 0.807
ACAC_0000515301 Angiostrongylus cantonensis ACAC_0000515301 I 0.790
ACOM022805 Anopheles coluzzii ACOM022805 I 0.807
ACYPI008148 Acyrthosiphon pisum ACYPI008148 I 0.767
ADIR005637 Anopheles dirus ADIR005637 I 0.795
AFAF000823 Anopheles farauti AFAF000823 I 0.807
AGAP010926 Anopheles gambiae AGAP010926 I 0.807
AMEC011115 Anopheles melas AMEC011115 I 0.807
AMEM009379 Anopheles merus AMEM009379 I 0.807
ASTEI06414 Anopheles stephensi ASTEI06414 I 0.807
BGIBMGA003190 Bombyx mori BGIBMGA003190 I 0.795
Bm9493 Brugia malayi Bm9493 I 0.787
BXY_1436800 Bursaphelenchus xylophilus BXY_1436800 I 0.787
Cflo_04170--XP_001120914.1_APIME Camponotus floridanus Cflo_04170--XP_001120914.1_APIME I 0.790
CGI_10001094 Crassostrea gigas CGI_10001094 I 0.769
DILT_0000061901 Diphyllobothrium latum DILT_0000061901 I 0.779
ENSAMXG00000016347 Astyanax mexicanus ENSAMXG00000016347 I 0.799
ENSPTRG00000000961 Pan troglodytes ENSPTRG00000000961 I 0.797
GA16696 Drosophila pseudoobscura FBgn0076711 I 0.827
GB48486 Apis mellifera GB48486 I 0.795
GD12667 Drosophila simulans FBgn0184394 I 0.825
GE20069 Drosophila yakuba FBgn0237393 I 0.825
GF10411 Drosophila ananassae FBgn0087452 I 0.827
GFI1 Procavia capensis ENSPCAG00000011020 I 0.797
GFI1B Macaca mulatta ENSMMUG00000005948 I 0.789
GFI1B Callithrix jacchus ENSCJAG00000018071 I 0.789
gfi1b Takifugu rubripes ENSTRUG00000004525 I 0.804
GFI1B Ochotona princeps ENSOPRG00000000125 I 0.789
GFI1B Homo sapiens ENSG00000165702 D 0.789
GG13774 Drosophila erecta FBgn0106037 I 0.825
GH16734 Drosophila grimshawi FBgn0124205 I 0.827
GI13460 Drosophila mojavensis FBgn0136216 I 0.827
GJ11823 Drosophila virilis FBgn0199077 I 0.827
GK12454 Drosophila willistoni FBgn0214464 I 0.827
GL15695 Drosophila persimilis FBgn0153299 I 0.827
GM24598 Drosophila sechellia FBgn0179461 I 0.825
HCOI00212900 Haemonchus contortus HCOI00212900 I 0.787
HelroG145534 Helobdella robusta HelroG145534 I 0.764
HelroG145685 Helobdella robusta HelroG145685 I 0.778
HelroG67579 Helobdella robusta HelroG67579 I 0.759
HMEL012459 Heliconius melpomene HMEL012459 I 0.812
KGM_22443 Danaus plexippus KGM_22443 I 0.812
L798_01833 Zootermopsis nevadensis L798_01833 I 0.799
LCUP007432 Lucilia cuprina LCUP007432 I 0.815
LLOJ009104 Lutzomyia longipalpis LLOJ009104 I 0.812
LotgiG98465 Lottia gigantea LotgiG98465 I 0.779
MDOA006012 Musca domestica MDOA006012 I 0.817
MESCA000812 Megaselia scalaris MESCA000812 I 0.800
MhA1_Contig1061.frz3.gene12 Meloidogyne hapla MhA1_Contig1061.frz3.gene12 I 0.785
nAv.1.0.1.g05276 Acanthocheilonema viteae nAv.1.0.1.g05276 I 0.792
NV16026 Nasonia vitripennis NV16026 I 0.807
PHUM248190 Pediculus humanus PHUM248190 I 0.799
PTRK_0000195600 Parastrongyloides trichosuri PTRK_0000195600 I 0.790
PXEA_0001261301 Protopolystoma xenopodis PXEA_0001261301 I 0.784
RSKR_0000656700 Rhabditophanes kr3021 RSKR_0000656700 I 0.787
sens Drosophila melanogaster FBgn0002573 D 0.825
SPAL_0000614400 Strongyloides papillosus SPAL_0000614400 I 0.790
SSLN_0000272801 Schistocephalus solidus SSLN_0000272801 I 0.779
SSTP_0000165900 Strongyloides stercoralis SSTP_0000165900 I 0.790
SVE_0901200 Strongyloides venezuelensis SVE_0901200 I 0.790
TC013474 Tribolium castaneum TC013474 I 0.788
WUBG_13248 Wuchereria bancrofti WUBG_13248 I 0.787