GLYMA16G27280 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA16G27280 T118429_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.797 0.933
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.797 0.933
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA16G27280.1 C2H2 ZF 359 381
GLYMA16G27280.1 C2H2 ZF 380 411

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_002280 Aspergillus clavatus CADACLAG00000102 N 0.000
ACRE_067040 Acremonium chrysogenum ACRE_067040 N 0.000
AFUA_3G14840 Aspergillus fumigatus CADAFUAG00004925 N 0.000
ANIA_08164 Aspergillus nidulans CADANIAG00004204 N 0.000
estExt_Genewise1Plus.C_110207 Cryphonectria parasitica estExt_Genewise1Plus.C_110207 N 0.000
EURHEDRAFT_408891 Aspergillus ruber EURHEDRAFT_408891 N 0.000
MGG_09027 Magnaporthe oryzae MGG_09027 N 0.000
MGG_13629 Magnaporthe oryzae MGG_13629 N 0.000
NCU09974 Neurospora crassa NCU09974 N 0.000
NFIA_062430 Neosartorya fischeri CADNFIAG00006157 N 0.000
TRIATDRAFT_35132 Trichoderma atroviride TRIATDRAFT_35132 N 0.000
VDBG_01908 Verticillium albo atrum VDBG_01908 N 0.000
VDBG_01908 Verticillium alfalfae VDBG_01908 N 0.000
VHEMI05407 Torrubiella hemipterigena VHEMI05407 N 0.000