MCINX001355 (Melitaea cinxia)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MCINX001355 T122843_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.783 0.860
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.783 0.825
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.783 0.825
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.783 0.825
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.783 0.825
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.757 0.789
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.757 0.789
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.757 0.789
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.757 0.789
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.757 0.789
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.757 0.789
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.757 0.789
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.757 0.789
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.757 0.789
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.757 0.789
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.757 0.789
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.757 0.789
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MCINX001355-PA C2H2 ZF 197 219
MCINX001355-PA C2H2 ZF 232 254
MCINX001355-PA C2H2 ZF 258 280
MCINX001355-PA C2H2 ZF 286 308
MCINX001355-PA C2H2 ZF 314 335

Links

Other C2H2 ZF family TFs
Other Melitaea cinxia TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28095.m000094 Ricinus communis 28095.m000094 N
AMTR_s00152p00031760 Amborella trichopoda AMTR_s00152p00031760 N
Aquca_075_00033 Aquilegia coerulea Aquca_075_00033 N
ATBZIP24 Vitis vinifera VIT_13s0158g00380 N
BGIOSGA004628 Oryza indica BGIOSGA004628 N
BGIOSGA017801 Oryza indica BGIOSGA017801 N
BGIOSGA020526 Oryza indica BGIOSGA020526 N
BGIOSGA034759 Oryza indica BGIOSGA034759 N
BGIOSGA036957 Oryza indica BGIOSGA036957 N
Bo1g006780 Brassica oleracea Bo1g006780 N
Bo3g091670 Brassica oleracea Bo3g091670 N
Bo3g167300 Brassica oleracea Bo3g167300 N
Bo9g024230 Brassica oleracea Bo9g024230 N
Bostr.18351s0138 Boechera stricta Bostr.18351s0138 N
Bostr.7867s1363 Boechera stricta Bostr.7867s1363 N
Bra011580 Brassica rapa Bra011580 N
Bra013048 Brassica rapa Bra013048 N
Bra033464 Brassica rapa Bra033464 N
Bra034668 Brassica rapa Bra034668 N
BRADI1G30140 Brachypodium distachyon BRADI1G30140 N
BRADI2G21197 Brachypodium distachyon BRADI2G21197 N
BRADI2G52590 Brachypodium distachyon BRADI2G52590 N
BZIP19 Arabidopsis thaliana AT4G35040 N
bZIP19 Arabidopsis lyrata scaffold_700623.1 N
BZIP23 Arabidopsis thaliana AT2G16770 N
bZIP23 Arabidopsis lyrata scaffold_303970.1 N
Cagra.0839s0005 Capsella grandiflora Cagra.0839s0005 N
Cagra.2350s0050 Capsella grandiflora Cagra.2350s0050 N
Carubv10005538m.g Capsella rubella Carubv10005538m.g N
Carubv10014436m.g Capsella rubella Carubv10014436m.g N
cassava766.valid.m1 Manihot esculenta cassava766.valid.m1 N
cassava767.valid.m1 Manihot esculenta cassava767.valid.m1 N
cassava7721.valid.m1 Manihot esculenta cassava7721.valid.m1 N
Ciclev10028931m.g Citrus clementina Ciclev10028931m.g N
Cla016078 Citrullus lanatus Cla016078 N
Cla020585 Citrullus lanatus Cla020585 N
Cucsa.234250 Cucumis sativus Cucsa.234250 N
Cucsa.370550 Cucumis sativus Cucsa.370550 N
Eucgr.I01416 Eucalyptus grandis Eucgr.I01416 N
evm.TU.supercontig_37.136 Carica papaya evm.TU.supercontig_37.136 N
F775_16738 Aegilops tauschii F775_16738 N
F775_17323 Aegilops tauschii F775_17323 N
F775_29696 Aegilops tauschii F775_29696 N
gene07554-v1.0-hybrid Fragaria vesca gene07554-v1.0-hybrid N
GLYMA11G11540 Glycine max GLYMA11G11540 N
GLYMA11G16050 Glycine max GLYMA11G16050 N
GRMZM2G000171 Zea mays GRMZM2G000171 N
GRMZM2G033230 Zea mays GRMZM2G033230 N
GRMZM2G055413 Zea mays GRMZM2G055413 N
GRMZM2G175870 Zea mays GRMZM2G175870 N
GSMUA_Achr4G00320_001 Musa acuminata GSMUA_Achr4G00320_001 N
GSMUA_Achr4G10150_001 Musa acuminata GSMUA_Achr4G10150_001 N
GSMUA_Achr7G03840_001 Musa acuminata GSMUA_Achr7G03840_001 N
gw1.34.187.1 Physcomitrella patens gw1.34.187.1 N
LPERR01G29490 Leersia perrieri LPERR01G29490 N
LPERR05G17340 Leersia perrieri LPERR05G17340 N
LPERR06G23100 Leersia perrieri LPERR06G23100 N
LPERR11G02130 Leersia perrieri LPERR11G02130 N
LPERR12G02240 Leersia perrieri LPERR12G02240 N
Lus10005073.g Linum usitatissimum Lus10005073.g N
Lus10014121.g Linum usitatissimum Lus10014121.g N
Lus10016368.g Linum usitatissimum Lus10016368.g N
Lus10027847.g Linum usitatissimum Lus10027847.g N
MDP0000190186 Malus domestica MDP0000190186 N
MDP0000893802 Malus domestica MDP0000893802 N
MDP0000898701 Malus domestica MDP0000898701 N
mgf003848m Mimulus guttatus mgf003848m N
MLOC_13410 Hordeum vulgare MLOC_13410 N
MLOC_5655 Hordeum vulgare MLOC_5655 N
MLOC_60894 Hordeum vulgare MLOC_60894 N
MTR_4g073100 Medicago truncatula MTR_4g073100 N
OB0044G10110 Oryza brachyantha OB0044G10110 N
OB01G42980 Oryza brachyantha OB01G42980 N
OB05G28920 Oryza brachyantha OB05G28920 N
OB06G35370 Oryza brachyantha OB06G35370 N
OB12G12480 Oryza brachyantha OB12G12480 N
OBART01G34150 Oryza barthii OBART01G34150 N
OBART05G21450 Oryza barthii OBART05G21450 N
OBART06G27540 Oryza barthii OBART06G27540 N
OBART11G02390 Oryza barthii OBART11G02390 N
OBART12G02110 Oryza barthii OBART12G02110 N
OGLUM01G38420 Oryza glumaepatula OGLUM01G38420 N
OGLUM05G22660 Oryza glumaepatula OGLUM05G22660 N
OGLUM06G28970 Oryza glumaepatula OGLUM06G28970 N
OGLUM11G02090 Oryza glumaepatula OGLUM11G02090 N
OLONG_011776 Oryza longistaminata OLONG_011776 N
OLONG_016758 Oryza longistaminata OLONG_016758 N
OLONG_023558 Oryza longistaminata OLONG_023558 N
OMERI01G30960 Oryza meridionalis OMERI01G30960 N
OMERI06G27590 Oryza meridionalis OMERI06G27590 N
OMERI12G01070 Oryza meridionalis OMERI12G01070 N
ONIVA01G38950 Oryza nivara ONIVA01G38950 N
ONIVA05G22130 Oryza nivara ONIVA05G22130 N
ONIVA06G30110 Oryza nivara ONIVA06G30110 N
ONIVA11G02620 Oryza nivara ONIVA11G02620 N
OPUNC01G33180 Oryza punctata OPUNC01G33180 N
OPUNC05G19110 Oryza punctata OPUNC05G19110 N
OPUNC06G25210 Oryza punctata OPUNC06G25210 N
OPUNC12G02170 Oryza punctata OPUNC12G02170 N
orange1.1g024365m.g Citrus sinensis orange1.1g024365m.g N
ORGLA01G0280700 Oryza glaberrima ORGLA01G0280700 N
ORGLA05G0186200 Oryza glaberrima ORGLA05G0186200 N
ORGLA06G0232500 Oryza glaberrima ORGLA06G0232500 N
ORUFI01G37470 Oryza rufipogon ORUFI01G37470 N
ORUFI05G22690 Oryza rufipogon ORUFI05G22690 N
ORUFI06G29500 Oryza rufipogon ORUFI06G29500 N
ORUFI12G02510 Oryza rufipogon ORUFI12G02510 N
OS01G0801901 Oryza sativa OS01G0801901 N
OS05G0495200 Oryza sativa OS05G0495200 N
OS06G0716800 Oryza sativa OS06G0716800 N
OS11G0139500 Oryza sativa OS11G0139500 N
Pavir.Db00007 Panicum virgatum Pavir.Db00007 N
Pavir.Ea03172 Panicum virgatum Pavir.Ea03172 N
Pavir.Eb03174 Panicum virgatum Pavir.Eb03174 N
Pavir.J00911 Panicum virgatum Pavir.J00911 N
Pavir.J05283 Panicum virgatum Pavir.J05283 N
Pavir.J21984 Panicum virgatum Pavir.J21984 N
Pavir.J25286 Panicum virgatum Pavir.J25286 N
PDK_20s1365351g001 Phoenix dactylifera PDK_20s1365351g001 N
PDK_20s1623091g001 Phoenix dactylifera PDK_20s1623091g001 N
PGSC0003DMG400011944 Solanum tuberosum PGSC0003DMG400011944 N
PGSC0003DMG401006188 Solanum tuberosum PGSC0003DMG401006188 N
Pm016548 Prunus mume Pm016548 N
Pm020862 Prunus mume Pm020862 N
POPTR_0001s05750 Populus trichocarpa POPTR_0001s05750 N
POPTR_0003s20320 Populus trichocarpa POPTR_0003s20320 N
POPTR_0009s13730 Populus trichocarpa POPTR_0009s13730 N
PRUPE_ppa009913mg Prunus persica PRUPE_ppa009913mg N
PRUPE_ppa019868mg Prunus persica PRUPE_ppa019868mg N
SapurV1A.0009s0600 Salix purpurea SapurV1A.0009s0600 N
SapurV1A.0445s0220 Salix purpurea SapurV1A.0445s0220 N
SapurV1A.0923s0130 Salix purpurea SapurV1A.0923s0130 N
Sb03g037300 Sorghum bicolor Sb03g037300 N
Sb09g024290 Sorghum bicolor Sb09g024290 N
Sb10g030250 Sorghum bicolor Sb10g030250 N
SELMODRAFT_409920 Selaginella moellendorffii SELMODRAFT_409920 N
Si002893m.g Setaria italica Si002893m.g N
Si007107m.g Setaria italica Si007107m.g N
Si037105m.g Setaria italica Si037105m.g N
Solyc01g111580.2 Solanum lycopersicum Solyc01g111580.2 N
TCM_042360 Theobroma cacao TCM_042360 N
Thhalv10022810m.g Eutrema salsugineum Thhalv10022810m.g N
Thhalv10026007m.g Eutrema salsugineum Thhalv10026007m.g N
TRAES3BF086800020CFD_g Triticum aestivum TRAES3BF086800020CFD_g N
Traes_1AL_00A8A2030 Triticum aestivum Traes_1AL_00A8A2030 N
Traes_5AS_6F02C9967 Triticum aestivum Traes_5AS_6F02C9967 N
Traes_5BS_FC54F9BEA Triticum aestivum Traes_5BS_FC54F9BEA N
Traes_5DS_4F7973584 Triticum aestivum Traes_5DS_4F7973584 N
Traes_7AL_C7CF7087B Triticum aestivum Traes_7AL_C7CF7087B N
Traes_7DL_7DDA16622 Triticum aestivum Traes_7DL_7DDA16622 N
TRIUR3_01653 Triticum urartu TRIUR3_01653 N
TRIUR3_18393 Triticum urartu TRIUR3_18393 N
TRIUR3_21208 Triticum urartu TRIUR3_21208 N
TRIUR3_23486 Triticum urartu TRIUR3_23486 N
VIT_03s0038g02420 Vitis vinifera VIT_03s0038g02420 N