CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDE_03425
(
Penicillium oxalicum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PDE_03425
T125600_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03184
M01474_2.00
Neurospora crassa
NDNNVATCNN
NNGATBNNHN
PBM
Najafabadi et al.(2015a)
pTH10252
0.793
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPS28479
C2H2 ZF
237
259
YICRTCHKAFSRPSSLRIHSHSH
EPS28479
C2H2 ZF
265
290
FHCTHPGCGKAFSVRSNMKRHERGCH
Links
Other
C2H2 ZF
family TFs
Other
Penicillium oxalicum
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MSY001_1480
Malassezia sympodialis
MSY001_1480
N