Smp_040390 (Schistosoma mansoni)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Smp_040390 T129192_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.757 0.783
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.757 0.783
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.757 0.783
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.757 0.783
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Smp_040390.1:pep C2H2 ZF 443 465
Smp_040390.1:pep C2H2 ZF 471 495
Smp_040390.1:pep C2H2 ZF 501 523

Links

Other C2H2 ZF family TFs
Other Schistosoma mansoni TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CEBPD Homo sapiens ENSG00000221869 D 0.000
CEBPD Otolemur garnettii ENSOGAG00000030449 I 0.000
CEBPD Monodelphis domestica ENSMODG00000010525 I 0.000
CEBPD Macaca mulatta ENSMMUG00000013151 I 0.000
CEBPD Pan troglodytes ENSPTRG00000042020 I 0.000
Cebpd Rattus norvegicus ENSRNOG00000050869 D 0.000
CEBPD Taeniopygia guttata ENSTGUG00000010839 I 0.000
CEBPD Gorilla gorilla ENSGGOG00000008077 I 0.000
cebpd Gasterosteus aculeatus ENSGACG00000017927 I 0.000
cebpd Tetraodon nigroviridis ENSTNIG00000000222 I 0.000
CEBPD Dasypus novemcinctus ENSDNOG00000025666 I 0.000
cebpd Danio rerio ENSDARG00000087303 I 0.000
CEBPD Callithrix jacchus ENSCJAG00000013678 I 0.000
cebpd Xenopus tropicalis XB-GENE-853588 I 0.000
Cebpd Mus musculus BAE29047.1 D 0.000
CEBPD Anolis carolinensis ENSACAG00000012009 I 0.000
cebpd.L Xenopus laevis XB-GENE-17330367 I 0.000
cebpd.S Xenopus laevis XB-GENE-866497 I 0.000
Cmyd_10014862 Chelonia mydas Cmyd_10014862 I 0.000
ENSAMXG00000025594 Astyanax mexicanus ENSAMXG00000025594 I 0.000
ENSAPLG00000002650 Anas platyrhynchos ENSAPLG00000002650 I 0.000
ENSCPOG00000025482 Cavia porcellus ENSCPOG00000025482 I 0.000
ENSFALG00000014184 Ficedula albicollis ENSFALG00000014184 I 0.000
ENSGMOG00000002585 Gadus morhua ENSGMOG00000002585 I 0.000
ENSLACG00000015084 Latimeria chalumnae ENSLACG00000015084 I 0.000
ENSLOCG00000017816 Lepisosteus oculatus ENSLOCG00000017816 I 0.000
ENSOANG00000007261 Ornithorhynchus anatinus ENSOANG00000007261 I 0.000
ENSOARG00000011169 Ovis aries ENSOARG00000011169 I 0.000
ENSOCUG00000025135 Oryctolagus cuniculus ENSOCUG00000025135 I 0.000
ENSONIG00000021429 Oreochromis niloticus ENSONIG00000021429 I 0.000
ENSPANG00000024953 Papio anubis ENSPANG00000024953 I 0.000
ENSPFOG00000020361 Poecilia formosa ENSPFOG00000020361 I 0.000
ENSPPYG00000018572 Pongo abelii ENSPPYG00000018572 I 0.000
ENSSSCG00000006276 Sus scrofa ENSSSCG00000006276 I 0.000
ENSSTOG00000021236 Ictidomys tridecemlineatus ENSSTOG00000021236 I 0.000
ENSXMAG00000019437 Xiphophorus maculatus ENSXMAG00000019437 I 0.000
Pvit_15371 Pogona vitticeps Pvit_15371 I 0.000