CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_88565
(
Trichoderma virens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TRIVIDRAFT_88565
T130868_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU09333
M01892_2.00
Neurospora crassa
NNNNGCCTDN
NHAGGCNNNN
PBM
Weirauch et al.(2014)
pTH8940
0.779
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK17450
C2H2 ZF
402
426
KKCREPGCTKEFKRPCDLTKHEKTH
Links
Other
C2H2 ZF
family TFs
Other
Trichoderma virens
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG18265
Drosophila melanogaster
FBgn0036725
N
GA14862
Drosophila pseudoobscura
FBgn0074889
N
GF10172
Drosophila ananassae
FBgn0087213
N
GG13615
Drosophila erecta
FBgn0084599
N
GH16591
Drosophila grimshawi
FBgn0124062
N
GI12438
Drosophila mojavensis
FBgn0135195
N
GJ12335
Drosophila virilis
FBgn0199581
N
GK17741
Drosophila willistoni
FBgn0219740
N
GL15581
Drosophila persimilis
FBgn0153185
N
GM25699
Drosophila sechellia
FBgn0180556
N
MDOA005434
Musca domestica
MDOA005434
N