Alligator_sinensis_CCG009080.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG009080.1 T133240_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG009080.1 C2H2 ZF 259 280
Alligator_sinensis_CCG009080.1 C2H2 ZF 306 329
Alligator_sinensis_CCG009080.1 C2H2 ZF 335 357

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10016724 Chelonia mydas Cmyd_10016724 N 0.827
ENSACAG00000024733 Anolis carolinensis ENSACAG00000024733 N 0.811
ENSAMEG00000018149 Ailuropoda melanoleuca ENSAMEG00000018149 N 0.804
ENSAPLG00000007392 Anas platyrhynchos ENSAPLG00000007392 N 0.827
ENSCAFG00000032382 Canis familiaris ENSCAFG00000032382 N 0.821
ENSCJAG00000012840 Callithrix jacchus ENSCJAG00000012840 N 0.821
ENSCSAG00000003107 Chlorocebus sabaeus ENSCSAG00000003107 N 0.821
ENSDNOG00000040837 Dasypus novemcinctus ENSDNOG00000040837 N 0.821
ENSDORG00000008940 Dipodomys ordii ENSDORG00000008940 N 0.805
ENSFALG00000006492 Ficedula albicollis ENSFALG00000006492 N 0.827
ENSMGAG00000007619 Meleagris gallopavo ENSMGAG00000007619 N 0.827
ENSMLUG00000029422 Myotis lucifugus ENSMLUG00000029422 N 0.821
ENSMPUG00000008220 Mustela putorius furo ENSMPUG00000008220 N 0.805
ENSP00000326630-D1 Bos grunniens ENSP00000326630-D1 N 0.821
ENSPANG00000005497 Papio anubis ENSPANG00000005497 N 0.821
ENSPPYG00000007637 Pongo abelii ENSPPYG00000007637 N 0.805
ENSSTOG00000027139 Ictidomys tridecemlineatus ENSSTOG00000027139 N 0.821
ENSTGUG00000007708 Taeniopygia guttata ENSTGUG00000007708 N 0.827
Myotis_brandtii_ZFPM1_10035266 Myotis brandtii Myotis_brandtii_ZFPM1_10035266 N 0.821
Ogr16761 Ophisaurus gracilis Ogr16761 N 0.811
Pvit_16331 Pogona vitticeps Pvit_16331 N 0.801
Zfpm1 Rattus norvegicus ENSRNOG00000043077 N 0.805
ZFPM1 Bos taurus ENSBTAG00000015766 N 0.821
ZFPM1 Tursiops truncatus ENSTTRG00000014484 N 0.821
ZFPM1 Loxodonta africana ENSLAFG00000013561 N 0.821
ZFPM1 Pteropus vampyrus ENSPVAG00000005587 N 0.800
ZFPM1 Otolemur garnettii ENSOGAG00000028472 N 0.805
Zfpm1 Mus musculus ENSMUSG00000049577 N 0.821
ZFPM1 Homo sapiens ENSG00000179588 N 0.821
ZFPM1 Gallus gallus ENSGALG00000006099 N 0.827