Alligator_sinensis_CCG012491.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG012491.1 T133294_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG012491.1 C2H2 ZF 244 266
Alligator_sinensis_CCG012491.1 C2H2 ZF 272 294
Alligator_sinensis_CCG012491.1 C2H2 ZF 300 322
Alligator_sinensis_CCG012491.1 C2H2 ZF 328 350
Alligator_sinensis_CCG012491.1 C2H2 ZF 354 378
Alligator_sinensis_CCG012491.1 C2H2 ZF 384 406
Alligator_sinensis_CCG012491.1 C2H2 ZF 412 434
Alligator_sinensis_CCG012491.1 C2H2 ZF 440 462
Alligator_sinensis_CCG012491.1 C2H2 ZF 468 490
Alligator_sinensis_CCG012491.1 C2H2 ZF 496 518
Alligator_sinensis_CCG012491.1 C2H2 ZF 524 547

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00039p00172240 Amborella trichopoda AMTR_s00039p00172240 I
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I
Aquca_003_00309 Aquilegia coerulea Aquca_003_00309 I
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I
ATMYB121 Arabidopsis thaliana AT3G30210 D
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I
ATMYB121 Vitis vinifera VIT_14s0083g01060 I
AtMYB27 Vitis vinifera VIT_08s0007g04830 I
AtMYB79 Arabidopsis thaliana AT4G13480 I
BGIOSGA005283 Oryza indica BGIOSGA005283 I
BGIOSGA006030 Oryza indica BGIOSGA006030 I
BGIOSGA010857 Oryza indica BGIOSGA010857 I
BGIOSGA011479 Oryza indica BGIOSGA011479 I
BGIOSGA014750 Oryza indica BGIOSGA014750 I
BGIOSGA035986 Oryza indica BGIOSGA035986 I
Bo1g098860 Brassica oleracea Bo1g098860 I
Bo2g057760 Brassica oleracea Bo2g057760 I
Bo3g083130 Brassica oleracea Bo3g083130 I
Bo5g043390 Brassica oleracea Bo5g043390 I
Bo6g097180 Brassica oleracea Bo6g097180 I
Bo6g106730 Brassica oleracea Bo6g106730 I
Bo7g033260 Brassica oleracea Bo7g033260 I
Bo7g050560 Brassica oleracea Bo7g050560 I
Bo7g088650 Brassica oleracea Bo7g088650 I
Bo9g009020 Brassica oleracea Bo9g009020 I
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I
Bostr.12659s0423 Boechera stricta Bostr.12659s0423 I
Bostr.15654s0036 Boechera stricta Bostr.15654s0036 I
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I
Bostr.26959s0063 Boechera stricta Bostr.26959s0063 I
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I
Bra001941 Brassica rapa Bra001941 I
Bra004041 Brassica rapa Bra004041 I
Bra004297 Brassica rapa Bra004297 I
Bra012482 Brassica rapa Bra012482 I
Bra015029 Brassica rapa Bra015029 I
Bra020744 Brassica rapa Bra020744 I
Bra025410 Brassica rapa Bra025410 I
Bra028369 Brassica rapa Bra028369 I
Bra033948 Brassica rapa Bra033948 I
Bra036202 Brassica rapa Bra036202 I
BRADI1G64140 Brachypodium distachyon BRADI1G64140 I
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I
Cagra.1111s0025 Capsella grandiflora Cagra.1111s0025 I
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I
Cagra.2231s0026 Capsella grandiflora Cagra.2231s0026 I
Carubv10007255m.g Capsella rubella Carubv10007255m.g I
Carubv10010143m.g Capsella rubella Carubv10010143m.g I
Carubv10014367m.g Capsella rubella Carubv10014367m.g I
Carubv10018530m.g Capsella rubella Carubv10018530m.g I
Carubv10019409m.g Capsella rubella Carubv10019409m.g I
Carubv10021411m.g Capsella rubella Carubv10021411m.g I
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I
cassava9274.m1 Manihot esculenta cassava9274.m1 I
cassava9891.m1 Manihot esculenta cassava9891.m1 I
Ca_05503 Cicer arietinum Ca_05503 I
Ca_07872 Cicer arietinum Ca_07872 I
Ca_20437 Cicer arietinum Ca_20437 I
chr1.CM0163.50.nc Lotus japonicus chr1.CM0163.50.nc I
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I
Ciclev10021479m.g Citrus clementina Ciclev10021479m.g I
Cla007745 Citrullus lanatus Cla007745 I
Cla016762 Citrullus lanatus Cla016762 I
Cla021798 Citrullus lanatus Cla021798 I
Cucsa.238540 Cucumis sativus Cucsa.238540 I
Cucsa.255900 Cucumis sativus Cucsa.255900 I
Cucsa.383230 Cucumis sativus Cucsa.383230 I
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I
evm.TU.supercontig_14.220 Carica papaya evm.TU.supercontig_14.220 I
evm.TU.supercontig_145.21 Carica papaya evm.TU.supercontig_145.21 I
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I
evm.TU.supercontig_798.1 Carica papaya evm.TU.supercontig_798.1 I
F775_06315 Aegilops tauschii F775_06315 I
F775_06959 Aegilops tauschii F775_06959 I
F775_14949 Aegilops tauschii F775_14949 I
F775_23572 Aegilops tauschii F775_23572 I
F775_29427 Aegilops tauschii F775_29427 I
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I
GLYMA04G26650 Glycine max GLYMA04G26650 I
GLYMA05G35050 Glycine max GLYMA05G35050 I
GLYMA06G38340 Glycine max GLYMA06G38340 I
GLYMA08G04670 Glycine max GLYMA08G04670 I
GLYMA08G27660 Glycine max GLYMA08G27660 I
GLYMA10G26681 Glycine max GLYMA10G26681 I
GLYMA10G33450 Glycine max GLYMA10G33450 I
GLYMA10G41930 Glycine max GLYMA10G41930 I
GLYMA15G14190 Glycine max GLYMA15G14190 I
GLYMA17G17560 Glycine max GLYMA17G17560 I
GLYMA18G50881 Glycine max GLYMA18G50881 I
GLYMA18G50891 Glycine max GLYMA18G50891 I
GLYMA20G20980 Glycine max GLYMA20G20980 I
GLYMA20G25110 Glycine max GLYMA20G25110 I
GLYMA20G34140 Glycine max GLYMA20G34140 I
Gorai.001G090100 Gossypium raimondii Gorai.001G090100 I
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I
Gorai.002G218600 Gossypium raimondii Gorai.002G218600 I
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I
GRMZM2G027697 Zea mays GRMZM2G027697 I
GRMZM2G043792 Zea mays GRMZM2G043792 I
GRMZM2G047626 Zea mays GRMZM2G047626 I
GRMZM2G054111 Zea mays GRMZM2G054111 I
GRMZM2G089686 Zea mays GRMZM2G089686 I
GRMZM2G130149 Zea mays GRMZM2G130149 I
GRMZM2G134279 Zea mays GRMZM2G134279 I
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I
GSMUA_Achr11G02410_001 Musa acuminata GSMUA_Achr11G02410_001 I
GSMUA_Achr11G17190_001 Musa acuminata GSMUA_Achr11G17190_001 I
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I
GSMUA_Achr1G03450_001 Musa acuminata GSMUA_Achr1G03450_001 I
GSMUA_Achr3G01370_001 Musa acuminata GSMUA_Achr3G01370_001 I
GSMUA_Achr4G29230_001 Musa acuminata GSMUA_Achr4G29230_001 I
GSMUA_Achr6G09760_001 Musa acuminata GSMUA_Achr6G09760_001 I
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I
GSMUA_Achr8G12710_001 Musa acuminata GSMUA_Achr8G12710_001 I
LjT44F11.120.nd Lotus japonicus LjT44F11.120.nd I
LPERR01G40120 Leersia perrieri LPERR01G40120 I
LPERR03G13320 Leersia perrieri LPERR03G13320 I
LPERR04G14700 Leersia perrieri LPERR04G14700 I
LPERR12G13390 Leersia perrieri LPERR12G13390 I
Lus10005079.g Linum usitatissimum Lus10005079.g I
Lus10014453.g Linum usitatissimum Lus10014453.g I
Lus10023711.g Linum usitatissimum Lus10023711.g I
MDP0000133412 Malus domestica MDP0000133412 I
MDP0000183451 Malus domestica MDP0000183451 I
MDP0000259898 Malus domestica MDP0000259898 I
MDP0000286143 Malus domestica MDP0000286143 I
MDP0000305363 Malus domestica MDP0000305363 I
MDP0000655330 Malus domestica MDP0000655330 I
MDP0000723614 Malus domestica MDP0000723614 I
MDP0000791870 Malus domestica MDP0000791870 I
MDP0000823458 Malus domestica MDP0000823458 I
mgf002201m Mimulus guttatus mgf002201m I
mgf004640m Mimulus guttatus mgf004640m I
MLOC_17928 Hordeum vulgare MLOC_17928 I
MLOC_52439 Hordeum vulgare MLOC_52439 I
MLOC_6786 Hordeum vulgare MLOC_6786 I
MLOC_9927 Hordeum vulgare MLOC_9927 I
MTR_1g045610 Medicago truncatula MTR_1g045610 I
MTR_1g073170 Medicago truncatula MTR_1g073170 I
MTR_1g110460 Medicago truncatula MTR_1g110460 I
MYB112 Arabidopsis thaliana AT1G48000 I
MYB112 Arabidopsis lyrata fgenesh2_kg.1__3889__AT1G48000.1 I
MYB116 Arabidopsis thaliana AT1G25340 D
MYB2 Oryza sativa OS03G0315400 I
MYB305 Arabidopsis thaliana AT3G24310 I
MYB62 Arabidopsis thaliana AT1G68320 D
MYB62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001171 I
MYBAS2 Oryza sativa OS12G0567300 I
OB01G54920 Oryza brachyantha OB01G54920 I
OB02G31640 Oryza brachyantha OB02G31640 I
OB03G13340 Oryza brachyantha OB03G13340 I
OB03G25040 Oryza brachyantha OB03G25040 I
OB04G25360 Oryza brachyantha OB04G25360 I
OB07G32480 Oryza brachyantha OB07G32480 I
OB12G23080 Oryza brachyantha OB12G23080 I
OBART01G45730 Oryza barthii OBART01G45730 I
OBART02G24300 Oryza barthii OBART02G24300 I
OGLUM02G24660 Oryza glumaepatula OGLUM02G24660 I
OMERI02G23750 Oryza meridionalis OMERI02G23750 I
ONIVA09G12460 Oryza nivara ONIVA09G12460 I
OPUNC01G44650 Oryza punctata OPUNC01G44650 I
OPUNC02G22200 Oryza punctata OPUNC02G22200 I
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I
orange1.1g043269m.g Citrus sinensis orange1.1g043269m.g I
orange1.1g044161m.g Citrus sinensis orange1.1g044161m.g I
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I
ORGLA02G0210000 Oryza glaberrima ORGLA02G0210000 I
ORGLA03G0030900 Oryza glaberrima ORGLA03G0030900 I
ORGLA03G0145100 Oryza glaberrima ORGLA03G0145100 I
ORGLA04G0153500 Oryza glaberrima ORGLA04G0153500 I
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I
ORUFI02G25650 Oryza rufipogon ORUFI02G25650 I
ORUFI03G03040 Oryza rufipogon ORUFI03G03040 I
ORUFI04G19690 Oryza rufipogon ORUFI04G19690 I
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I
OS02G0618400 Oryza sativa OS02G0618400 I
OS03G0142600 Oryza sativa OS03G0142600 I
OS04G0508500 Oryza sativa OS04G0508500 I
Pavir.Aa01294 Panicum virgatum Pavir.Aa01294 I
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I
Pavir.Ga01308 Panicum virgatum Pavir.Ga01308 I
Pavir.Ia04415 Panicum virgatum Pavir.Ia04415 I
Pavir.J11500 Panicum virgatum Pavir.J11500 I
Pavir.J28445 Panicum virgatum Pavir.J28445 I
Pavir.J37992 Panicum virgatum Pavir.J37992 I
Pavir.J39490 Panicum virgatum Pavir.J39490 I
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I
PGSC0003DMG400005641 Solanum tuberosum PGSC0003DMG400005641 I
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I
PK10274.1 Cannabis sativa PK10274.1 I
PK22268.1 Cannabis sativa PK22268.1 I
Pm009050 Prunus mume Pm009050 I
Pm011657 Prunus mume Pm011657 I
Pm015392 Prunus mume Pm015392 I
Pm025177 Prunus mume Pm025177 I
Pm027048 Prunus mume Pm027048 I
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I
POPTR_0004s11460 Populus trichocarpa POPTR_0004s11460 I
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I
POPTR_0010s13290 Populus trichocarpa POPTR_0010s13290 I
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I
PRUPE_ppa008877mg Prunus persica PRUPE_ppa008877mg I
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I
PRUPE_ppa021577mg Prunus persica PRUPE_ppa021577mg I
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I
SapurV1A.0021s0310 Salix purpurea SapurV1A.0021s0310 I
SapurV1A.0078s0260 Salix purpurea SapurV1A.0078s0260 I
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I
Sb01g037110 Sorghum bicolor Sb01g037110 I
Sb01g047450 Sorghum bicolor Sb01g047450 I
Sb04g026210 Sorghum bicolor Sb04g026210 I
Sb08g018580 Sorghum bicolor Sb08g018580 I
Si010822m.g Setaria italica Si010822m.g I
Si018007m.g Setaria italica Si018007m.g I
Si023104m.g Setaria italica Si023104m.g I
Si035722m.g Setaria italica Si035722m.g I
Si037281m.g Setaria italica Si037281m.g I
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I
Solyc03g119370.1 Solanum lycopersicum Solyc03g119370.1 I
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I
TCM_009642 Theobroma cacao TCM_009642 I
TCM_018971 Theobroma cacao TCM_018971 I
TCM_021037 Theobroma cacao TCM_021037 I
TCM_024180 Theobroma cacao TCM_024180 I
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I
Thhalv10012051m.g Eutrema salsugineum Thhalv10012051m.g I
Thhalv10018962m.g Eutrema salsugineum Thhalv10018962m.g I
Thhalv10026896m.g Eutrema salsugineum Thhalv10026896m.g I
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I
Traes_2AL_605C25CDF Triticum aestivum Traes_2AL_605C25CDF I
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I
Traes_4AS_E4294BADC Triticum aestivum Traes_4AS_E4294BADC I
Traes_4DL_9023F3504 Triticum aestivum Traes_4DL_9023F3504 I
Traes_6AL_89BA7115C Triticum aestivum Traes_6AL_89BA7115C I
Traes_6BL_8E4A831B6 Triticum aestivum Traes_6BL_8E4A831B6 I
Traes_6DL_FDFCBA57D Triticum aestivum Traes_6DL_FDFCBA57D I
Traes_6DL_FDFCBA57D1 Triticum aestivum Traes_6DL_FDFCBA57D1 I
TRIUR3_16862 Triticum urartu TRIUR3_16862 I
TRIUR3_18020 Triticum urartu TRIUR3_18020 I
TRIUR3_22432 Triticum urartu TRIUR3_22432 I
TRIUR3_31527 Triticum urartu TRIUR3_31527 I
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I