Alligator_sinensis_CCG016192.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG016192.1 T133350_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB6
M08364_2.00 		Homo sapiens
SBNGCTCCAKVDYCN
NGRHBMTGGAGCNVS		 ChIP-seq
Schmitges et al.(2016)
Q15916.MEME 		0.807 0.967
ZBTB6
M08940_2.00 		Homo sapiens
NRGCTCCAKCDYC
GRHGMTGGAGCYN		 Misc
Kulakovskiy et al.(2013)
ZBTB6_HUMAN.H11MO.0.C 		0.807 0.967
ZBTB6
M10307_2.00 		Homo sapiens
BGGCTCYAKSRYC
GRYSMTRGAGCCV		 Transfac
Matys et al.(2006)
V$ZID_01 		0.807 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG016192.1 C2H2 ZF 113 135
Alligator_sinensis_CCG016192.1 C2H2 ZF 138 160
Alligator_sinensis_CCG016192.1 C2H2 ZF 166 188
Alligator_sinensis_CCG016192.1 C2H2 ZF 194 217

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R013762 Aptenodytes forsteri Afo_R013762 I 0.827
Brh_R009093 Buceros rhinoceros Brh_R009093 I 0.827
Cmyd_10017123 Chelonia mydas Cmyd_10017123 I 0.827
ENSCPOG00000010372 Cavia porcellus ENSCPOG00000010372 I 0.807
ENSCSAG00000019713 Chlorocebus sabaeus ENSCSAG00000019713 I 0.807
ENSFALG00000002014 Ficedula albicollis ENSFALG00000002014 I 0.827
ENSMICG00000003244 Microcebus murinus ENSMICG00000003244 I 0.807
ENSNLEG00000017214 Nomascus leucogenys ENSNLEG00000017214 I 0.807
ENSOARG00000019166 Ovis aries ENSOARG00000019166 I 0.807
ENSP00000362763 Macaca fascicularis ENSP00000362763 I 0.807
ENSP00000362763-D1 Bos grunniens ENSP00000362763-D1 I 0.807
ENSPANG00000016323 Papio anubis ENSPANG00000016323 I 0.807
ENSPPYG00000019584 Pongo abelii ENSPPYG00000019584 I 0.807
ENSPSIG00000001016 Pelodiscus sinensis ENSPSIG00000001016 I 0.827
ENSSHAG00000008092 Sarcophilus harrisii ENSSHAG00000008092 I 0.825
ENSSTOG00000010670 Ictidomys tridecemlineatus ENSSTOG00000010670 I 0.807
Gfo_R007918 Geospiza fortis Gfo_R007918 I 0.827
Myotis_brandtii_ZBTB6_10028432 Myotis brandtii Myotis_brandtii_ZBTB6_10028432 I 0.804
Ogr13906 Ophisaurus gracilis Ogr13906 I 0.827
Pvit_08507 Pogona vitticeps Pvit_08507 I 0.827
Tal_R000026 Tyto alba Tal_R000026 I 0.827
ZBTB26 Oryctolagus cuniculus ENSOCUG00000008815 I 0.807
ZBTB6 Sorex araneus ENSSARG00000012333 I 0.807
Zbtb6 Rattus norvegicus ENSRNOG00000009340 I 0.807
ZBTB6 Vicugna pacos ENSVPAG00000005997 I 0.807
ZBTB6 Sus scrofa ENSSSCG00000005576 I 0.802
ZBTB6 Taeniopygia guttata ENSTGUG00000006932 I 0.827
ZBTB6 Tursiops truncatus ENSTTRG00000016956 I 0.807
ZBTB6 Otolemur garnettii ENSOGAG00000010682 I 0.807
zbtb6 Xenopus tropicalis XB-GENE-5823898 I 0.807
ZBTB6 Gorilla gorilla ENSGGOG00000014555 I 0.807
ZBTB6 Canis familiaris ENSCAFG00000032570 I 0.807
ZBTB6 Choloepus hoffmanni ENSCHOG00000013771 I 0.807
ZBTB6 Callithrix jacchus ENSCJAG00000020049 I 0.807
ZBTB6 Dasypus novemcinctus ENSDNOG00000014591 I 0.807
ZBTB6 Equus caballus ENSECAG00000002222 I 0.807
ZBTB6 Erinaceus europaeus ENSEEUG00000013087 I 0.807
ZBTB6 Echinops telfairi ENSETEG00000009867 I 0.807
ZBTB6 Homo sapiens ENSG00000186130 D 0.807
ZBTB6 Gallus gallus ENSGALG00000021570 I 0.827
ZBTB6 Pteropus vampyrus ENSPVAG00000017594 I 0.807
ZBTB6 Loxodonta africana ENSLAFG00000014046 I 0.807
ZBTB6 Meleagris gallopavo ENSMGAG00000008047 I 0.827
ZBTB6 Myotis lucifugus ENSMLUG00000014003 I 0.804
ZBTB6 Macaca mulatta ENSMMUG00000000496 I 0.807
ZBTB6 Monodelphis domestica ENSMODG00000023551 I 0.825
Zbtb6 Mus musculus ENSMUSG00000066798 I 0.807
ZBTB6 Bos taurus ENSBTAG00000039815 I 0.807
ZBTB6 Pan troglodytes ENSPTRG00000021340 I 0.807