ENSBTAP00000011067-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000011067-D1 T134533_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OVOL2
M00235_2.00 		Homo sapiens
NCCGYTANNN
NNNTARCGGN		 PBM
Barrera et al.(2016)
OVOL2_REF 		0.805 0.935
OVOL2
M04445_2.00 		Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX 		0.805 0.935
OVOL2
M04447_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX 		0.805 0.935
Ovol2
M08993_2.00 		Mus musculus
HCCGTTAN
NTAACGGD		 Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C 		0.805 0.935
OVOL2
M10207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MOVOB_01 		0.805 0.935
OVOL2
M04446_2.00 		Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX 		0.805 0.935
OVOL2
M04448_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX 		0.805 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000011067-D1 C2H2 ZF 128 150
ENSBTAP00000011067-D1 C2H2 ZF 156 178
ENSBTAP00000011067-D1 C2H2 ZF 184 207
ENSBTAP00000011067-D1 C2H2 ZF 223 246

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000566001 Angiostrongylus costaricensis ACOC_0000566001 N
ANCCAN_08467 Ancylostoma caninum ANCCAN_08467 N
ANCDUO_06017 Ancylostoma duodenale ANCDUO_06017 N
DME_0000341901 Dracunculus medinensis DME_0000341901 N
HCOI01748400 Haemonchus contortus HCOI01748400 N
HPBE_0000472101 Heligmosomoides bakeri HPBE_0000472101 N
HPLM_0001935601 Haemonchus placei HPLM_0001935601 N
NECAME_03833 Necator americanus NECAME_03833 N
OESDEN_21180 Oesophagostomum dentatum OESDEN_21180 N
SVUK_0001263701 Strongylus vulgaris SVUK_0001263701 N
TELCIR_02972 Teladorsagia circumcincta TELCIR_02972 N