Gfo_R005319 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R005319 T135720_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R005319 C2H2 ZF 79 103
Gfo_R005319 C2H2 ZF 109 131
Gfo_R005319 C2H2 ZF 138 160
Gfo_R005319 C2H2 ZF 202 224
Gfo_R005319 C2H2 ZF 230 253

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015690 Calypte anna Aan_R015690 N 0.813
Afo_R011128 Aptenodytes forsteri Afo_R011128 N 0.827
Alligator_sinensis_CCG000339.1 Alligator sinensis Alligator_sinensis_CCG000339.1 N 0.827
Brh_R004704 Buceros rhinoceros Brh_R004704 N 0.827
Cmyd_10009540 Chelonia mydas Cmyd_10009540 N 0.818
ENSAPLG00000005061 Anas platyrhynchos ENSAPLG00000005061 N 0.819
ENSFALG00000005449 Ficedula albicollis ENSFALG00000005449 N 0.827
ENSGMOG00000018396 Gadus morhua ENSGMOG00000018396 N 0.772
ENSMEUG00000001198 Macropus eugenii ENSMEUG00000001198 N 0.827
ENSMEUG00000015507 Macropus eugenii ENSMEUG00000015507 N 0.758
ENSPSIG00000004000 Pelodiscus sinensis ENSPSIG00000004000 N 0.827
ENSSHAG00000011174 Sarcophilus harrisii ENSSHAG00000011174 N 0.827
ENSSHAG00000015101 Sarcophilus harrisii ENSSHAG00000015101 N 0.758
Ogr04942 Ophisaurus gracilis Ogr04942 N 0.818
PLAGL1 Monodelphis domestica ENSMODG00000017250 N 0.758
PLAGL2 Taeniopygia guttata ENSTGUG00000006525 N 0.827
PLAGL2 Anolis carolinensis ENSACAG00000008743 N 0.818
PLAGL2 Monodelphis domestica ENSMODG00000019464 N 0.827
PLAGL2 Meleagris gallopavo ENSMGAG00000007476 N 0.819
PLAGL2 Gallus gallus ENSGALG00000006586 N 0.819
Pvit_11206 Pogona vitticeps Pvit_11206 N 0.808
Tal_R000481 Tyto alba Tal_R000481 N 0.827