CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ogr10212
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr10212
T136652_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr10212
C2H2 ZF
324
346
YVCELCQKTFKTASILKAHMITH
Ogr10212
C2H2 ZF
352
374
YECKLCGTSFRTKGSLIRHHRRH
Ogr10212
C2H2 ZF
380
401
YKCKKCGKSFRESGALTRHLKS
Ogr10212
C2H2 ZF
579
601
HVCPYCSEIFSEHSSLDLHINGH
Ogr10212
C2H2 ZF
607
629
FTCEECGKEFTKGYLLKKHQEVH
Ogr10212
C2H2 ZF
635
657
FRCGECGKLYKTIAHVKGHRRVH
Ogr10212
C2H2 ZF
663
685
YPCPKCGKRYKTKNAQQVHFRTH
Ogr10212
C2H2 ZF
691
713
YVCQFCSQGFREKGSLVRHIRHH
Ogr10212
C2H2 ZF
719
740
FKCYKCGRGFAEHGTLNRHLRT
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R012427
Aptenodytes forsteri
Afo_R012427
N
0.757
E4F1
Anolis carolinensis
ENSACAG00000013796
N
0.808
E4F1
Gallus gallus
ENSGALG00000005900
N
0.757
ENSAPLG00000005530
Anas platyrhynchos
ENSAPLG00000005530
N
0.756
Pvit_13131
Pogona vitticeps
Pvit_13131
N
0.776