Ogr12593 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr12593 T136674_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP2
M04525_2.00 		Homo sapiens
NYWAGYCCCGCCCMCYH
DRGKGGGCGGGRCTWRN		 SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX 		0.807 0.957
SP2
M08326_2.00 		Homo sapiens
YCCCGCCCM
KGGGCGGGR		 ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE 		0.807 0.957
SP2
M08092_2.00 		Homo sapiens
BYCCCGCCYCYBNNB
VNNVRGRGGCGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0516.1 		0.807 0.957
SP2
M07932_2.00 		Homo sapiens
KSCTAGAGMGGCBVB
VBVGCCKCTCTAGSM		 ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha 		0.807 0.957
SP2
M08911_2.00 		Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS		 Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A 		0.807 0.957
Sp2
M08970_2.00 		Mus musculus
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS		 Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B 		0.807 0.957
SP2
M10250_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_01 		0.807 0.957
SP2
M10251_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_04 		0.807 0.957
SP2
M10252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_06 		0.807 0.957
SP2
M10253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_Q3_01 		0.807 0.957
SP2
M10254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_Q3 		0.807 0.957
SP2
M04526_2.00 		Homo sapiens
NTWAGYCCCGCCCMCTT
AAGKGGGCGGGRCTWAN		 SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX 		0.807 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr12593 C2H2 ZF 566 590
Ogr12593 C2H2 ZF 596 620
Ogr12593 C2H2 ZF 626 648

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ahr2 Oryzias latipes ENSORLG00000000135 N
AHRR Pteropus vampyrus ENSPVAG00000007881 N
AHRR Myotis lucifugus ENSMLUG00000012589 N
AHRR Meleagris gallopavo ENSMGAG00000007591 N
Ahrr Mus musculus ENSMUSG00000021575 N
ahrr Takifugu rubripes ENSTRUG00000003745 N
AHRR Gorilla gorilla ENSGGOG00000013694 N
AHRR Gallus gallus ENSGALG00000013402 N
AHRR Homo sapiens ENSG00000063438 N
AHRR Felis catus ENSFCAG00000015430 N
AHRR Equus caballus ENSECAG00000017812 N
AHRR Otolemur garnettii ENSOGAG00000010416 N
Ahrr Rattus norvegicus ENSRNOG00000014721 N
AHRR Ochotona princeps ENSOPRG00000013408 N
ahrrb Tetraodon nigroviridis ENSTNIG00000008751 N
ahrrb Gasterosteus aculeatus ENSGACG00000001925 N
ahrrb Danio rerio ENSDARG00000052618 N
ENSAMEG00000008443 Ailuropoda melanoleuca ENSAMEG00000008443 N
ENSAMXG00000013942 Astyanax mexicanus ENSAMXG00000013942 N
ENSAMXG00000015160 Astyanax mexicanus ENSAMXG00000015160 N
ENSAPLG00000013653 Anas platyrhynchos ENSAPLG00000013653 N
ENSCSAG00000017432 Chlorocebus sabaeus ENSCSAG00000017432 N
ENSDORG00000008881 Dipodomys ordii ENSDORG00000008881 N
ENSFCAG00000024757 Felis catus ENSFCAG00000024757 N
ENSGMOG00000009114 Gadus morhua ENSGMOG00000009114 N
ENSLACG00000000606 Latimeria chalumnae ENSLACG00000000606 N
ENSLOCG00000011345 Lepisosteus oculatus ENSLOCG00000011345 N
ENSMMUG00000030507 Macaca mulatta ENSMMUG00000030507 N
ENSMMUP00000001012 Macaca fascicularis ENSMMUP00000001012 N
ENSMMUP00000035736 Macaca fascicularis ENSMMUP00000035736 N
ENSMODG00000028175 Monodelphis domestica ENSMODG00000028175 N
ENSMPUG00000010246 Mustela putorius furo ENSMPUG00000010246 N
ENSNLEG00000010815 Nomascus leucogenys ENSNLEG00000010815 N
ENSOARG00000015756 Ovis aries ENSOARG00000015756 N
ENSOCUG00000021638 Oryctolagus cuniculus ENSOCUG00000021638 N
ENSONIG00000017966 Oreochromis niloticus ENSONIG00000017966 N
ENSPANG00000023865 Papio anubis ENSPANG00000023865 N
ENSPFOG00000012230 Poecilia formosa ENSPFOG00000012230 N
ENSPSIG00000007107 Pelodiscus sinensis ENSPSIG00000007107 N
ENSSHAG00000010002 Sarcophilus harrisii ENSSHAG00000010002 N
ENSTGUG00000008731 Taeniopygia guttata ENSTGUG00000008731 N
fgenesh2_pg.scaffold_330000001 Branchiostoma floridae fgenesh2_pg.scaffold_330000001 N
Ogr18615 Ophisaurus gracilis Ogr18615 N
PDCD6 Macaca mulatta ENSMMUG00000000752 N
yakG008778 Bos grunniens yakG008778 N