Pm022201 (Prunus mume)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pm022201 T136822_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.827 0.956
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.827 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm022201 C2H2 ZF 362 384
Pm022201 C2H2 ZF 383 414

Links

Other C2H2 ZF family TFs
Other Prunus mume TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001040 Calypte anna Aan_R001040 I 0.000
Afo_R003471 Aptenodytes forsteri Afo_R003471 I 0.000
AHR Sus scrofa ENSSSCG00000030484 I 0.000
Ahr Rattus norvegicus ENSRNOG00000004342 I 0.000
Ahr Dipodomys ordii ENSDORG00000007750 I 0.000
AHR Pan troglodytes ENSPTRG00000018955 I 0.000
AHR Homo sapiens ENSG00000106546 D 0.000
AHR Oryctolagus cuniculus ENSOCUG00000003877 I 0.000
Ahr Mus musculus ENSMUSG00000019256 D 0.000
BGLB005801 Biomphalaria glabrata BGLB005801 I 0.000
CapteG145851 Capitella teleta CapteG145851 I 0.000
CGI_10012885 Crassostrea gigas CGI_10012885 I 0.000
DILT_0000966101 Diphyllobothrium latum DILT_0000966101 I 0.000
ENSAMEG00000010559 Ailuropoda melanoleuca ENSAMEG00000010559 I 0.000
ENSAPLG00000008769 Anas platyrhynchos ENSAPLG00000008769 I 0.000
ENSCAFG00000002448 Canis familiaris ENSCAFG00000002448 I 0.000
ENSCJAG00000001029 Callithrix jacchus ENSCJAG00000001029 I 0.000
ENSCPOG00000005481 Cavia porcellus ENSCPOG00000005481 I 0.000
ENSCSAG00000013508 Chlorocebus sabaeus ENSCSAG00000013508 I 0.000
ENSETEG00000019660 Echinops telfairi ENSETEG00000019660 I 0.000
ENSGALG00000010836 Gallus gallus ENSGALG00000010836 I 0.000
ENSGGOG00000011367 Gorilla gorilla ENSGGOG00000011367 I 0.000
ENSLACG00000002803 Latimeria chalumnae ENSLACG00000002803 I 0.000
ENSLAFG00000015328 Loxodonta africana ENSLAFG00000015328 I 0.000
ENSMGAG00000010174 Meleagris gallopavo ENSMGAG00000010174 I 0.000
ENSMLUG00000000097 Myotis lucifugus ENSMLUG00000000097 I 0.000
ENSMMUG00000012203 Macaca mulatta ENSMMUG00000012203 I 0.000
ENSMODG00000001528 Monodelphis domestica ENSMODG00000001528 I 0.000
ENSMPUG00000013964 Mustela putorius furo ENSMPUG00000013964 I 0.000
ENSOARG00000009234 Ovis aries ENSOARG00000009234 I 0.000
ENSP00000385642 Macaca fascicularis ENSP00000385642 I 0.000
ENSPANG00000002444 Papio anubis ENSPANG00000002444 I 0.000
ENSPCAG00000006894 Procavia capensis ENSPCAG00000006894 I 0.000
ENSPPYG00000017758 Pongo abelii ENSPPYG00000017758 I 0.000
ENSPSIG00000010051 Pelodiscus sinensis ENSPSIG00000010051 I 0.000
ENSSARG00000001961 Sorex araneus ENSSARG00000001961 I 0.000
ENSSHAG00000001563 Sarcophilus harrisii ENSSHAG00000001563 I 0.000
ENSSSCG00000015364 Sus scrofa ENSSSCG00000015364 I 0.000
ENSSTOG00000003086 Ictidomys tridecemlineatus ENSSTOG00000003086 I 0.000
ENSTBEG00000007210 Tupaia belangeri ENSTBEG00000007210 I 0.000
ENSTGUG00000002585 Taeniopygia guttata ENSTGUG00000002585 I 0.000
ENSTSYG00000010830 Tarsius syrichta ENSTSYG00000010830 I 0.000
ENSTTRG00000006913 Tursiops truncatus ENSTTRG00000006913 I 0.000
ENSVPAG00000008443 Vicugna pacos ENSVPAG00000008443 I 0.000
Gfo_R002789 Geospiza fortis Gfo_R002789 I 0.000
HelroG91511 Helobdella robusta HelroG91511 N 0.000
LotgiG117861 Lottia gigantea LotgiG117861 I 0.000
Myotis_brandtii_AHR_10031750 Myotis brandtii Myotis_brandtii_AHR_10031750 I 0.000
Ocbimv22038775m.g Octopus bimaculoides Ocbimv22038775m.g N 0.000
SMU15013078 Schmidtea mediterranea SMU15013078 I 0.000
SMU15033026 Schmidtea mediterranea SMU15033026 I 0.000
Tal_R011867 Tyto alba Tal_R011867 I 0.000