Pvit_18995 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_18995 T137541_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Glis2
M00129_2.00 		Mus musculus
NKACCCCYYNN
NNRRGGGGTMN		 PBM
Badis et al.(2009)
Glis2_1757 		0.811 0.986
GLIS2
M02887_2.00 		Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM		 SELEX
Jolma et al.(2013)
GLIS2_1 		0.811 0.971
GLIS2
M04449_2.00 		Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY		 SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX 		0.811 0.971
GLIS2
M04450_2.00 		Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH		 SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX 		0.811 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_18995 C2H2 ZF 234 256
Pvit_18995 C2H2 ZF 262 286
Pvit_18995 C2H2 ZF 292 316

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004454.1 Alligator sinensis Alligator_sinensis_CCG004454.1 I 0.827
Cmyd_10017688 Chelonia mydas Cmyd_10017688 I 0.811
ENSAMEG00000002010 Ailuropoda melanoleuca ENSAMEG00000002010 I 0.811
ENSAMXG00000011871 Astyanax mexicanus ENSAMXG00000011871 I 0.772
ENSBTAP00000012119-D1 Bos grunniens ENSBTAP00000012119-D1 I 0.811
ENSCPOG00000004787 Cavia porcellus ENSCPOG00000004787 I 0.827
ENSCSAG00000009593 Chlorocebus sabaeus ENSCSAG00000009593 I 0.811
ENSDORG00000014886 Dipodomys ordii ENSDORG00000014886 I 0.811
ENSLACG00000004164 Latimeria chalumnae ENSLACG00000004164 I 0.827
ENSMPUG00000015020 Mustela putorius furo ENSMPUG00000015020 I 0.811
ENSNLEG00000009834 Nomascus leucogenys ENSNLEG00000009834 I 0.811
ENSOARG00000003260 Ovis aries ENSOARG00000003260 I 0.811
ENSPPYG00000007055 Pongo abelii ENSPPYG00000007055 I 0.811
ENSSHAG00000010956 Sarcophilus harrisii ENSSHAG00000010956 I 0.827
ENSSTOG00000025049 Ictidomys tridecemlineatus ENSSTOG00000025049 I 0.811
GLIS2 Felis catus ENSFCAG00000011229 I 0.811
GLIS2 Bos taurus ENSBTAG00000009199 I 0.811
GLIS2 Canis familiaris ENSCAFG00000019227 I 0.811
GLIS2 Callithrix jacchus ENSCJAG00000019770 I 0.811
GLIS2 Tursiops truncatus ENSTTRG00000002711 I 0.811
GLIS2 Sus scrofa ENSSSCG00000023653 I 0.811
Glis2 Rattus norvegicus ENSRNOG00000004766 I 0.811
GLIS2 Pteropus vampyrus ENSPVAG00000017802 I 0.811
GLIS2 Pan troglodytes ENSPTRG00000007714 I 0.811
GLIS2 Procavia capensis ENSPCAG00000011063 I 0.827
GLIS2 Ochotona princeps ENSOPRG00000000484 I 0.811
GLIS2 Oryctolagus cuniculus ENSOCUG00000012971 I 0.811
GLIS2 Echinops telfairi ENSETEG00000006418 I 0.811
GLIS2 Homo sapiens ENSG00000126603 D 0.811
GLIS2 Gorilla gorilla ENSGGOG00000004717 I 0.811
GLIS2 Erinaceus europaeus ENSEEUG00000007346 I 0.808
GLIS2 Loxodonta africana ENSLAFG00000018480 I 0.811
GLIS2 Microcebus murinus ENSMICG00000017817 I 0.811
GLIS2 Myotis lucifugus ENSMLUG00000008930 I 0.811
GLIS2 Monodelphis domestica ENSMODG00000016375 I 0.827
GLIS2 Equus caballus ENSECAG00000020639 I 0.811
Glis2 Mus musculus ENSMUSG00000014303 D 0.811
GLIS2 Dasypus novemcinctus ENSDNOG00000010899 I 0.795
GLIS2 Ornithorhynchus anatinus ENSOANG00000010385 I 0.827
GLIS2 Otolemur garnettii ENSOGAG00000015200 I 0.811
glis2.L Xenopus laevis XB-GENE-6252690 I 0.789
glis2b Tetraodon nigroviridis ENSTNIG00000009741 I 0.827
Myotis_brandtii_GLIS2_10028036 Myotis brandtii Myotis_brandtii_GLIS2_10028036 I 0.811
SINV25327 Solenopsis invicta SINV25327 I 0.762
SPU_010542 Strongylocentrotus purpuratus SPU_010542 I 0.769