CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_630101
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_630101
T138741_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_630101
C2H2 ZF
348
370
LPCEVCGKAFDRPSLLRRHMRTH
estExt_fgenesh2_pg.C_630101
C2H2 ZF
376
398
HACDVCGKAFSTSSSLNTHRRIH
estExt_fgenesh2_pg.C_630101
C2H2 ZF
404
426
HVCQVCGKRFTASSNLYYHRMTH
estExt_fgenesh2_pg.C_630101
C2H2 ZF
432
454
HKCTMCSKSFPTPGDLKSHMYVH
estExt_fgenesh2_pg.C_630101
C2H2 ZF
460
482
FKCDVCNRGFSKLTNLKNHMVLH
estExt_fgenesh2_pg.C_630101
C2H2 ZF
488
512
YECPLCNKRFALPCNLRTHLKTVCH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG104598
Capitella teleta
CapteG104598
N
0.772
LotgiG139049
Lottia gigantea
LotgiG139049
N
0.762
tetur03g05600
Tetranychus urticae
tetur03g05600
N
0.757