MDP0000807856 (Malus domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MDP0000807856 T143241_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.827 0.956
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.827 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000807856 C2H2 ZF 357 379
MDP0000807856 C2H2 ZF 378 409

Links

Other C2H2 ZF family TFs
Other Malus domestica TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_069570 Acremonium chrysogenum ACRE_069570 I 0.000
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I 0.000
BAUCODRAFT_120297 Baudoinia compniacensis BAUCODRAFT_120297 I 0.000
BBA_00148 Beauveria bassiana BBA_00148 I 0.000
Bcin01g06200 Botrytis cinerea Bcin01g06200 I 0.000
BGHDH14_bgh01184 Blumeria graminis BGHDH14_bgh01184 I 0.000
CCM_06184 Cordyceps militaris CCM_06184 I 0.000
CFIO01_01433 Colletotrichum fioriniae CFIO01_01433 I 0.000
CGGC5_5664 Colletotrichum gloeosporioides CGGC5_5664 I 0.000
CH063_05074 Colletotrichum higginsianum CH063_05074 I 0.000
Cob_03876 Colletotrichum orbiculare Cob_03876 I 0.000
CPUR_03335 Claviceps purpurea CPUR_03335 I 0.000
CSUB01_02498 Colletotrichum sublineola CSUB01_02498 I 0.000
CTHT_0056810 Chaetomium thermophilum CTHT_0056810 I 0.000
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I 0.000
estExt_fgenesh1_kg.C_chr_160021 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_160021 I 0.000
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 I 0.000
estExt_fgenesh3_pm.C_70282 Neurospora discreta estExt_fgenesh3_pm.C_70282 I 0.000
F503_07224 Ophiostoma piceae uamh F503_07224 I 0.000
FFUJ_01281 Fusarium fujikuroi FFUJ_01281 I 0.000
fgenesh1_pm.C_scaffold_5000435 Cryphonectria parasitica fgenesh1_pm.C_scaffold_5000435 I 0.000
FGRRES_01100 Fusarium graminearum FGRRES_01100 D 0.000
FOXG_00297 Fusarium oxysporum FOXG_00297 I 0.000
FPSE_09056 Fusarium pseudograminearum FPSE_09056 I 0.000
FVEG_01221 Fusarium verticillioides FVEG_01221 I 0.000
GGTG_12202 Gaeumannomyces graminis GGTG_12202 I 0.000
GLRG_04370 Colletotrichum graminicola GLRG_04370 I 0.000
GMDG_01589 Pseudogymnoascus destructans GMDG_01589 I 0.000
HMPREF1541_02811 Cyphellophora europaea HMPREF1541_02811 I 0.000
HMPREF1624_00506 Sporothrix schenckii HMPREF1624_00506 I 0.000
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I 0.000
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I 0.000
MAC_05257 Metarhizium acridum MAC_05257 I 0.000
MAJ_02218 Metarhizium majus MAJ_02218 I 0.000
MAM_06825 Metarhizium album MAM_06825 I 0.000
MANI_109748 Metarhizium anisopliae MANI_109748 I 0.000
MAPG_09676 Magnaporthe poae MAPG_09676 I 0.000
MBR_03692 Metarhizium brunneum MBR_03692 I 0.000
MGG_11712 Magnaporthe oryzae MGG_11712 I 0.000
MGU_04884 Metarhizium guizhouense MGU_04884 I 0.000
MPH_01872 Macrophomina phaseolina MPH_01872 I 0.000
Mycgr3G106635 Zymoseptoria tritici Mycgr3G106635 I 0.000
NCU03266 Neurospora crassa NCU03266 D 0.000
NechaG98757 Fusarium solani NechaG98757 I 0.000
NEUTE1DRAFT_133183 Neurospora tetrasperma NEUTE1DRAFT_133183 I 0.000
OIDMADRAFT_194382 Oidiodendron maius OIDMADRAFT_194382 I 0.000
PFICI_01897 Pestalotiopsis fici PFICI_01897 I 0.000
PODANS_1_2230 Podospora anserina PODANS_1_2230 I 0.000
PV05_02773 Exophiala xenobiotica PV05_02773 I 0.000
PV06_07195 Exophiala oligosperma PV06_07195 I 0.000
PV07_12240 Cladophialophora immunda PV07_12240 I 0.000
PV08_06661 Exophiala spinifera PV08_06661 I 0.000
PV10_01019 Exophiala mesophila PV10_01019 I 0.000
PV11_06012 Exophiala sideris PV11_06012 I 0.000
S40285_01877 Stachybotrys chlorohalonata S40285_01877 I 0.000
S40288_08800 Stachybotrys chartarum S40288_08800 I 0.000
SBOR_0341 Sclerotinia borealis SBOR_0341 I 0.000
SEPMUDRAFT_122411 Sphaerulina musiva SEPMUDRAFT_122411 I 0.000
SMAC_02983 Sordaria macrospora SMAC_02983 I 0.000
SPBR_06725 Sporothrix brasiliensis SPBR_06725 I 0.000
SS1G_04522 Sclerotinia sclerotiorum SS1G_04522 I 0.000
THITE_2131584 Thielavia terrestris THITE_2131584 I 0.000
TRIREDRAFT_57059 Trichoderma reesei TRIREDRAFT_57059 I 0.000
TRIVIDRAFT_42882 Trichoderma virens TRIVIDRAFT_42882 I 0.000
UV8b_5567 Ustilaginoidea virens UV8b_5567 I 0.000
V499_00333 Pseudogymnoascus pannorum V499_00333 I 0.000
VDAG_03007 Verticillium dahliae VDAG_03007 I 0.000
VDBG_05845 Verticillium alfalfae VDBG_05845 I 0.000
VDBG_05845 Verticillium albo atrum VDBG_05845 I 0.000
VHEMI06514 Torrubiella hemipterigena VHEMI06514 I 0.000
X797_003774 Metarhizium robertsii X797_003774 I 0.000