AAB34088 (Xenopus laevis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AAB34088 T143598_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.825 0.974
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.825 0.974
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.825 0.974
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.825 0.974
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.825 0.974
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.825 0.974
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.825 0.974
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.825 0.974
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.825 0.974
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.825 0.974
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.825 0.974
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.825 0.974
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.821 0.965
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.767 0.807
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAB34088 C2H2 ZF 126 148
AAB34088 C2H2 ZF 157 179
AAB34088 C2H2 ZF 183 205
AAB34088 C2H2 ZF 211 233
AAB34088 C2H2 ZF 239 260

Links

Other C2H2 ZF family TFs
Other Xenopus laevis TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010729 Aedes aegypti AAEL010729 N
AALB000559 Anopheles albimanus AALB000559 N
AATE001996 Anopheles atroparvus AATE001996 N
ACHR003493 Anopheles christyi ACHR003493 N
ACOM040349 Anopheles coluzzii ACOM040349 N
ACUA027777 Anopheles culicifacies ACUA027777 N
ADAC007198 Anopheles darlingi ADAC007198 N
ADIR005005 Anopheles dirus ADIR005005 N
AEPI004928 Anopheles epiroticus AEPI004928 N
AFAF009787 Anopheles farauti AFAF009787 N
AFUN000860 Anopheles funestus AFUN000860 N
AGAP009676 Anopheles gambiae AGAP009676 N
AMEC003278 Anopheles melas AMEC003278 N
AMEM015089 Anopheles merus AMEM015089 N
AMIN001531 Anopheles minimus AMIN001531 N
AQUA011291 Anopheles quadriannulatus AQUA011291 N
ASIS006930 Anopheles sinensis ASIS006930 N
ASTEI07340 Anopheles stephensi ASTEI07340 N
CLEC008027 Cimex lectularius CLEC008027 N
LDEC006219 Leptinotarsa decemlineata LDEC006219 N
LLOJ008218 Lutzomyia longipalpis LLOJ008218 N
PHUM590320 Pediculus humanus PHUM590320 N
PPAI004753 Phlebotomus papatasi PPAI004753 N