SMU15000684 (Schmidtea mediterranea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SMU15000684 T145079_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.763 0.754
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15000684 C2H2 ZF 121 143
SMU15000684 C2H2 ZF 149 171
SMU15000684 C2H2 ZF 177 200

Links

Other C2H2 ZF family TFs
Other Schmidtea mediterranea TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL017521 Aedes aegypti AAEL017521 I 0.759
AARA001055 Anopheles arabiensis AARA001055 I 0.759
AATE002741 Anopheles atroparvus AATE002741 I 0.759
ACHR004136 Anopheles christyi ACHR004136 I 0.759
ACUA027175 Anopheles culicifacies ACUA027175 I 0.759
ADAC004491 Anopheles darlingi ADAC004491 I 0.759
ADIR001008 Anopheles dirus ADIR001008 I 0.759
AFUN010393 Anopheles funestus AFUN010393 I 0.759
AGAP000114 Anopheles gambiae AGAP000114 I 0.759
AMEC022552 Anopheles melas AMEC022552 I 0.759
AMEM014020 Anopheles merus AMEM014020 I 0.759
ASIS014406 Anopheles sinensis ASIS014406 I 0.759
ASTEI07557 Anopheles stephensi ASTEI07557 I 0.759
Bm3814 Brugia malayi Bm3814 I 0.763
BTMF_0001741201 Brugia timori BTMF_0001741201 I 0.763
CBG09216 Caenorhabditis briggsae CBG09216 I 0.763
CBN00506 Caenorhabditis brenneri CBN00506 I 0.763
CJA03277 Caenorhabditis japonica CJA03277 I 0.763
CJA37604 Caenorhabditis japonica CJA37604 I 0.763
CPIJ018505 Culex quinquefasciatus CPIJ018505 I 0.759
CpipJ_CPIJ018505 Culex pipiens CpipJ_CPIJ018505 I 0.759
CRE25436 Caenorhabditis remanei CRE25436 I 0.763
HCOI01936300 Haemonchus contortus HCOI01936300 I 0.763
HMEL006827 Heliconius melpomene HMEL006827 I 0.759
ISCW013547 Ixodes scapularis ISCW013547 I 0.758
LCUP004963 Lucilia cuprina LCUP004963 I 0.759
LDEC009536 Leptinotarsa decemlineata LDEC009536 I 0.759
lin-48 Caenorhabditis elegans WBGene00003033 D 0.763
MDOA012259 Musca domestica MDOA012259 I 0.759
NECAME_03083 Necator americanus NECAME_03083 I 0.759
PPAI008669 Phlebotomus papatasi PPAI008669 I 0.759
TC008099 Tribolium castaneum TC008099 I 0.759
TELCIR_07985 Teladorsagia circumcincta TELCIR_07985 I 0.763
tetur12g02740 Tetranychus urticae tetur12g02740 I 0.759
tetur12g02760 Tetranychus urticae tetur12g02760 I 0.759
tetur12g02810 Tetranychus urticae tetur12g02810 I 0.759