ovol2 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-854193 T145595_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OVOL2
M00235_2.00 		Homo sapiens
NCCGYTANNN
NNNTARCGGN		 PBM
Barrera et al.(2016)
OVOL2_REF 		0.805 0.891
OVOL2
M04445_2.00 		Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX 		0.805 0.891
OVOL2
M04447_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX 		0.805 0.891
OVOL2
M10207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MOVOB_01 		0.805 0.891
OVOL2
M04446_2.00 		Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX 		0.805 0.891
OVOL2
M04448_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX 		0.805 0.891
Ovol2
M08993_2.00 		Mus musculus
HCCGTTAN
NTAACGGD		 Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C 		0.796 0.880
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH75593 C2H2 ZF 131 153
AAH75593 C2H2 ZF 159 181
AAH75593 C2H2 ZF 187 210
AAH75593 C2H2 ZF 226 249
CAJ83285 C2H2 ZF 131 153
CAJ83285 C2H2 ZF 159 181
CAJ83285 C2H2 ZF 187 210
CAJ83285 C2H2 ZF 226 249

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG017544.1 Alligator sinensis Alligator_sinensis_CCG017544.1 N
Cmyd_10002293 Chelonia mydas Cmyd_10002293 N
ENSAMEG00000018759 Ailuropoda melanoleuca ENSAMEG00000018759 N
ENSAMXG00000016320 Astyanax mexicanus ENSAMXG00000016320 N
ENSAPLG00000010954 Anas platyrhynchos ENSAPLG00000010954 N
ENSBTAP00000020381-D1 Bos grunniens ENSBTAP00000020381-D1 N
ENSCSAG00000010631 Chlorocebus sabaeus ENSCSAG00000010631 N
ENSFALG00000014380 Ficedula albicollis ENSFALG00000014380 N
ENSGACG00000005679 Gasterosteus aculeatus ENSGACG00000005679 N
ENSLACG00000010412 Latimeria chalumnae ENSLACG00000010412 N
ENSMEUG00000012682 Macropus eugenii ENSMEUG00000012682 N
ENSMPUG00000018555 Mustela putorius furo ENSMPUG00000018555 N
ENSNLEG00000005308 Nomascus leucogenys ENSNLEG00000005308 N
ENSOARG00000010486 Ovis aries ENSOARG00000010486 N
ENSONIG00000007283 Oreochromis niloticus ENSONIG00000007283 N
ENSP00000297857 Macaca fascicularis ENSP00000297857 N
ENSPANG00000017349 Papio anubis ENSPANG00000017349 N
ENSPFOG00000003808 Poecilia formosa ENSPFOG00000003808 N
ENSPFOG00000018986 Poecilia formosa ENSPFOG00000018986 N
ENSPPYG00000018856 Pongo abelii ENSPPYG00000018856 N
ENSPSIG00000006703 Pelodiscus sinensis ENSPSIG00000006703 N
ENSSHAG00000013245 Sarcophilus harrisii ENSSHAG00000013245 N
ENSSTOG00000016571 Ictidomys tridecemlineatus ENSSTOG00000016571 N
ENSXMAG00000001501 Xiphophorus maculatus ENSXMAG00000001501 N
ENSXMAG00000008964 Xiphophorus maculatus ENSXMAG00000008964 N
Myotis_brandtii_ZHX1_10012476 Myotis brandtii Myotis_brandtii_ZHX1_10012476 N
Pvit_18219 Pogona vitticeps Pvit_18219 N
XP_002941441 Xenopus tropicalis XP_002941441 N
ZHX1 Gorilla gorilla ENSGGOG00000028565 N
ZHX1 Anolis carolinensis ENSACAG00000009608 N
ZHX1 Bos taurus ENSBTAG00000015334 N
ZHX1 Canis familiaris ENSCAFG00000001001 N
ZHX1 Callithrix jacchus ENSCJAG00000000934 N
ZHX1 Dasypus novemcinctus ENSDNOG00000043739 N
ZHX1 Equus caballus ENSECAG00000023451 N
ZHX1 Erinaceus europaeus ENSEEUG00000000664 N
ZHX1 Felis catus ENSFCAG00000013745 N
ZHX1 Homo sapiens ENSG00000165156 D
ZHX1 Tursiops truncatus ENSTTRG00000005426 N
ZHX1 Takifugu rubripes ENSTRUG00000017544 N
ZHX1 Tetraodon nigroviridis ENSTNIG00000019079 N
ZHX1 Tupaia belangeri ENSTBEG00000005916 N
ZHX1 Otolemur garnettii ENSOGAG00000027737 N
ZHX1 Sus scrofa ENSSSCG00000005984 N
ZHX1 Loxodonta africana ENSLAFG00000005884 N
ZHX1 Sorex araneus ENSSARG00000008993 N
Zhx1 Rattus norvegicus ENSRNOG00000006412 N
ZHX1 Pan troglodytes ENSPTRG00000020550 N
ZHX1 Meleagris gallopavo ENSMGAG00000012584 N
ZHX1 Myotis lucifugus ENSMLUG00000013728 N
ZHX1 Macaca mulatta ENSMMUG00000006050 N
ZHX1 Monodelphis domestica ENSMODG00000002035 N
ZHX1 Procavia capensis ENSPCAG00000007447 N
Zhx1 Mus musculus ENSMUSG00000022361 N
ZHX1 Oryctolagus cuniculus ENSOCUG00000009776 N